Factsheet for Bra004719.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular, vacuole

Predictor Summary:

nucleus 1
extracellular 5
endoplasmic reticulum 4
vacuole 5
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane, vacuole
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX79853	Canola	extracellular, plasma membrane, vacuole	92.51	98.13
AT2G42800.1	Thale cress	vacuole	77.31	75.97
VIT_12s0142g00620.t01	Wine grape	cytosol	57.27	60.89
Solyc10g007830.1.1	Tomato	endoplasmic reticulum, plasma membrane, vacuole	54.63	56.11
PGSC0003DMT400054822	Potato	plasma membrane	55.51	55.38
GSMUA_Achr4P15510_001	Banana	cytosol	49.56	53.19
Zm00001d002194_P001	Maize	cytosol	14.98	41.21
Bra011040.1-P	Field mustard	extracellular, plasma membrane	30.18	31.07
Bra004336.1-P	Field mustard	extracellular, golgi	29.3	30.86
Bra003549.1-P	Field mustard	extracellular	33.04	30.18
Bra025154.1-P	Field mustard	extracellular, plasma membrane, vacuole	30.18	28.9
TraesCS3A01G282900.1	Wheat	extracellular, plasma membrane	27.75	27.94
TraesCS1B01G365000.1	Wheat	extracellular, vacuole	26.87	27.92
TraesCS3D01G282900.1	Wheat	extracellular, plasma membrane	27.53	27.84
Os05t0530701-01	Rice	plasma membrane	28.85	27.81
TraesCS1A01G350800.1	Wheat	extracellular, plasma membrane	26.65	27.69
HORVU3Hr1G069160.1	Barley	extracellular, plasma membrane	27.75	27.51
TraesCS1D01G353700.1	Wheat	extracellular, vacuole	26.43	27.46
Zm00001d011757_P001	Maize	extracellular, plasma membrane	26.65	27.01
Os01t0729400-01	Rice	plasma membrane, vacuole	26.87	26.87
Zm00001d038742_P001	Maize	mitochondrion	27.31	26.5
TraesCS3B01G316600.1	Wheat	extracellular, plasma membrane	26.65	26.42
EES19861	Sorghum	plastid	27.31	26.16
EES01405	Sorghum	extracellular, plasma membrane	27.31	26.16
Zm00001d010813_P001	Maize	mitochondrion	26.43	25.81
HORVU1Hr1G081210.1	Barley	cytosol, peroxisome, plasma membrane	25.99	21.11
Bra003550.1-P	Field mustard	extracellular	5.29	19.35
Bra019819.1-P	Field mustard	nucleus	26.65	8.05

Protein Annotations

MapMan:11.10.2.3.3	Gene3D:3.80.10.10	EnsemblPlantsGene:Bra004719	EnsemblPlants:Bra004719.1	EnsemblPlants:Bra004719.1-P	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005618	GO:GO:0005623	GO:GO:0009505
GO:GO:0030312	InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp
UniProt:M4CKI4	PFAM:PF00560	PFAM:PF13855	PRINTS:PR00019	PANTHER:PTHR45183	PANTHER:PTHR45183:SF3
SMART:SM00369	SUPFAM:SSF52058	SignalP:SignalP-noTM	UniParc:UPI000254798E	SEG:seg	:

Description

AT2G42800 (E=7e-163) AtRLP29 | AtRLP29 (Receptor Like Protein 29); protein binding

Coordinates

chrA05:+:1509860..1511224

Molecular Weight (calculated)

49403.1 Da

IEP (calculated)

9.165

GRAVY (calculated)

0.065

Length

454 amino acids

Sequence
(BLAST)

001: MKTKRALPSP TSLLLHLLIT PLFLCEANTV SMPPSESETL FTIMDSMSSD QQWRRSHPNP CAPGSSWPGI ECKTGPDRLP HVSRLDFGSA PNPSCKSSAS
101: FPHLIFSLPF LQSVFFFNCF THLPTTIIFP IKLLTNSSLQ QLSLRSNPSL SGQIPPLISS LTSLQILTLS QNKLTGAIPP VLFSLKNLLH LDLSYNKLTG
201: TIPLQLGSLN SLLGLDLSYN SLTGLIPHTI SQLGTLQKLD LSSNALSGAI PQGLEKLRSL SFIALSNNRL RGAFPKGISK LESLQYFIMD NNPMHAPLPV
301: ELGLLPKLQE IQLENSGYSG VIPESYTRLM NLSSLSLANN KLTGEIPSGF DSLPHVFHLN LSRNSLIGVV PFDSSFLRRL GKNLDLSGNR GLCLNPEDEF
401: SVVKTGVGVC GRNVTSGPSP KISQASTSRC CYGSCFLSNA LFQVVLFLGL RHHR

Best Arabidopsis Sequence Match ( AT2G42800.1 )
(BLAST)

001: MTMKRALPSP SSLLFFFLLI TPLFLCQENR VSASMPPSES ETLFKIMESM SSDQQWRQSH PNPCAPGSSW PGIECKTGPD HLSHVSRLDF GSAPNPSCKS
101: SASFPSSIFT LPFLQSVFFF NCFTHFPTTI MFPIKLIPNS SLQQLSLRSN PSLSGQIPPR ISSLKSLQIL TLSQNRLTGD IPPAIFSLKS LVHLDLSYNK
201: LTGKIPLQLG NLNNLVGLDL SYNSLTGTIP PTISQLGMLQ KLDLSSNSLF GRIPEGVEKL RSLSFMALSN NKLKGAFPKG ISNLQSLQYF IMDNNPMFVA
301: LPVELGFLPK LQELQLENSG YSGVIPESYT KLTNLSSLSL ANNRLTGEIP SGFESLPHVF HLNLSRNLLI GVVPFDSSFL RRLGKNLDLS GNRGLCLNPE
401: DEFSVVKTGV DVCGKNVSSG GGLSVHSSKK KSQASRYYRS CFFANALFPF ALFLGLHQRW VL

Arabidopsis Description

AtRLP29RLP29 [Source:UniProtKB/TrEMBL;Acc:A0A178VT48]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.