Factsheet for GSMUA_Achr4P15510_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 3
extracellular 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_12s0142g00620.t01	Wine grape	cytosol	56.74	56.21
AT2G42800.1	Thale cress	vacuole	56.5	51.73
Solyc10g007830.1.1	Tomato	endoplasmic reticulum, plasma membrane, vacuole	53.9	51.58
Bra004719.1-P	Field mustard	extracellular, plasma membrane, vacuole	53.19	49.56
PGSC0003DMT400054822	Potato	plasma membrane	53.19	49.45
CDY50822	Canola	extracellular, plasma membrane, vacuole	49.65	49.07
CDX79853	Canola	extracellular, plasma membrane, vacuole	49.41	48.83
Zm00001d002194_P001	Maize	cytosol	15.84	40.61
GSMUA_Achr8P03860_001	Banana	cytosol	27.66	32.87
TraesCS3D01G282900.1	Wheat	extracellular, plasma membrane	31.68	29.84
GSMUA_Achr9P00780_001	Banana	cytosol	31.21	29.6
TraesCS1B01G365000.1	Wheat	extracellular, vacuole	30.02	29.06
TraesCS3A01G282900.1	Wheat	extracellular, plasma membrane	30.97	29.05
TraesCS1D01G353700.1	Wheat	extracellular, vacuole	29.79	28.83
HORVU3Hr1G069160.1	Barley	extracellular, plasma membrane	31.21	28.82
Zm00001d011757_P001	Maize	extracellular, plasma membrane	30.5	28.79
GSMUA_Achr7P24750_001	Banana	cytosol	32.62	28.75
TraesCS1A01G350800.1	Wheat	extracellular, plasma membrane	29.55	28.6
TraesCS3B01G316600.1	Wheat	extracellular, plasma membrane	30.97	28.6
GSMUA_Achr10P...	Banana	cytosol	24.82	28.46
Os01t0729400-01	Rice	plasma membrane, vacuole	30.5	28.41
EES01405	Sorghum	extracellular, plasma membrane	31.44	28.06
Os05t0530701-01	Rice	plasma membrane	31.21	28.03
GSMUA_AchrUn_...	Banana	cytosol	24.35	27.84
Zm00001d038742_P001	Maize	mitochondrion	30.26	27.35
Zm00001d010813_P001	Maize	mitochondrion	29.08	26.45
EES19861	Sorghum	plastid	29.55	26.37
GSMUA_AchrUn_...	Banana	extracellular, plasma membrane	28.13	25.76
HORVU1Hr1G081210.1	Barley	cytosol, peroxisome, plasma membrane	29.31	22.18
GSMUA_Achr7P01190_001	Banana	extracellular	20.8	19.56

Protein Annotations

MapMan:11.10.2.3.3	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575
GO:GO:0005618	GO:GO:0005623	GO:GO:0009505	GO:GO:0030312	EnsemblPlantsGene:GSMUA_Achr4G15510_001	EnsemblPlants:GSMUA_Achr4P15510_001
EnsemblPlants:GSMUA_Achr4T15510_001	InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp
UniProt:M0SP66	PFAM:PF13855	PRINTS:PR00019	PANTHER:PTHR45183	PANTHER:PTHR45183:SF3	SMART:SM00369
SUPFAM:SSF52058	UniParc:UPI0002961B8B	SEG:seg	:	:	:

Description

Putative Protein TOO MANY MOUTHS [Source:GMGC_GENE;Acc:GSMUA_Achr4G15510_001]

Coordinates

chr4:+:11713582..11714853

Molecular Weight (calculated)

46268.5 Da

IEP (calculated)

6.040

GRAVY (calculated)

-0.023

Length

423 amino acids

Sequence
(BLAST)

001: MDPVERDTLF CVMKNMSSDR DWRSSNPDPC KPDSSWPGIE CKPGLDNLLH VTRLDFGVAP NPTCKESATF PSEIFELPYL ASIFFLDCFK GVETSLSLPP
101: PTRKASPPAY ASLQQLSLIS NPSFVGAIPS HIFSITSLRV LTLSQNRLHG TIPDSISELN SLVHLDLSYN FLTGSIPSQI GRLKDLVGLD LSYNSLAGSI
201: PPSIGQLRLL QKLDLSSNSI AGIVPDSLQN LRFLDFLAIS NNNLSGEFPK GIAKLQNLQY FIMDDNPMFV KLPWQLGRLA KLQELRLSNS GYSGVIPGSF
301: AWLRNLTTLS LENNRLTGGI PAGLSDLEKL YHLNLSSNLL SGVVPFDAGF FKRLGSNMDL RENSGLCING SQSLDGINIG VDVCRDNGSN SSLPKSVDKS
401: GGAPFQVCNF YFQLMGTVII WSW

Best Arabidopsis Sequence Match ( AT2G42800.1 )
(BLAST)

001: MTMKRALPSP SSLLFFFLLI TPLFLCQENR VSASMPPSES ETLFKIMESM SSDQQWRQSH PNPCAPGSSW PGIECKTGPD HLSHVSRLDF GSAPNPSCKS
101: SASFPSSIFT LPFLQSVFFF NCFTHFPTTI MFPIKLIPNS SLQQLSLRSN PSLSGQIPPR ISSLKSLQIL TLSQNRLTGD IPPAIFSLKS LVHLDLSYNK
201: LTGKIPLQLG NLNNLVGLDL SYNSLTGTIP PTISQLGMLQ KLDLSSNSLF GRIPEGVEKL RSLSFMALSN NKLKGAFPKG ISNLQSLQYF IMDNNPMFVA
301: LPVELGFLPK LQELQLENSG YSGVIPESYT KLTNLSSLSL ANNRLTGEIP SGFESLPHVF HLNLSRNLLI GVVPFDSSFL RRLGKNLDLS GNRGLCLNPE
401: DEFSVVKTGV DVCGKNVSSG GGLSVHSSKK KSQASRYYRS CFFANALFPF ALFLGLHQRW VL

Arabidopsis Description

AtRLP29RLP29 [Source:UniProtKB/TrEMBL;Acc:A0A178VT48]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.