Factsheet for GSMUA_AchrUn_randomP20550_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
plasma membrane 1
cytosol 2
mitochondrion 1
endoplasmic reticulum 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr10P...	Banana	cytosol	64.86	65.04
GSMUA_Achr8P03860_001	Banana	cytosol	50.0	51.97
GSMUA_Achr9P00780_001	Banana	cytosol	59.73	49.55
CDY20429	Canola	cytosol	15.95	40.97
KRG92006	Soybean	extracellular, plasma membrane	52.7	40.88
KRH70637	Soybean	extracellular, golgi	51.35	40.77
VIT_01s0011g02800.t01	Wine grape	extracellular	52.97	40.58
KRH75532	Soybean	extracellular, plasma membrane	50.27	40.0
KRH34777	Soybean	extracellular, vacuole	51.62	39.87
CDY19386	Canola	cytosol	43.51	39.46
AT1G68780.1	Thale cress	extracellular, golgi	45.68	39.12
CDX97999	Canola	extracellular	44.05	38.81
PGSC0003DMT400002145	Potato	extracellular	48.65	38.54
AT1G13230.1	Thale cress	extracellular	44.05	38.44
Bra004336.1-P	Field mustard	extracellular, golgi	44.59	38.28
CDX95990	Canola	extracellular, vacuole	44.32	38.05
Solyc05g009990.2.1	Tomato	endoplasmic reticulum, golgi, plasma membrane	47.84	37.74
Solyc06g069290.2.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	46.49	36.99
PGSC0003DMT400010384	Potato	cytosol	45.14	36.7
CDY33598	Canola	extracellular, golgi	42.7	36.66
KRH56709	Soybean	extracellular, plasma membrane	46.76	36.27
AT3G25670.1	Thale cress	extracellular	46.22	36.0
KRH03836	Soybean	extracellular, plasma membrane, vacuole	45.95	35.87
CDX83542	Canola	extracellular, plasma membrane, vacuole	45.14	35.31
Bra025154.1-P	Field mustard	extracellular, plasma membrane, vacuole	44.59	34.81
CDY13577	Canola	vacuole	44.59	34.81
GSMUA_Achr7P24750_001	Banana	cytosol	32.43	25.0
GSMUA_Achr4P15510_001	Banana	cytosol	27.84	24.35
GSMUA_AchrUn_...	Banana	extracellular, plasma membrane	26.76	21.43
GSMUA_Achr7P01190_001	Banana	extracellular	18.92	15.56
Bra019819.1-P	Field mustard	nucleus	44.05	10.85

Protein Annotations

EnsemblPlants:GSMUA_AchrUn_randomP20550_001	EnsemblPlants:GSMUA_AchrUn_randomT20550_001	EnsemblPlantsGene:GSMUA_AchrUn_randomG20550_001	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp
PANTHER:PTHR44325	PANTHER:PTHR44325:SF1	PFAM:PF13855	SEG:seg	SMART:SM00369	SUPFAM:SSF52058
UniParc:UPI000294DFCE	UniProt:M0UAW4	MapMan:35.1	:	:	:

Description

Putative Piriformospora indica-insensitive protein 2 [Source:GMGC_GENE;Acc:GSMUA_AchrUn_randomG20550_001]

Coordinates

chrchrUn_random:+:99493353..99495420

Molecular Weight (calculated)

40284.0 Da

IEP (calculated)

4.599

GRAVY (calculated)

0.086

Length

370 amino acids

Sequence
(BLAST)

001: MEKAEQQALY LVIQDLVGNW WNGTALYPDP CGWTPIQGVS CDLFDGLWYV TALSIGPVLE NSLQCAEEAK LTNLGHLSNL QSLVLVDNSL AGELPVELGN
101: LVHLKRLMLS GNNNSLSGSL PPSLCSLSSL LKLDLSNNQF HGSLPPELAS LTHLTLLDLR SNNFSGAWFR SLAGMASLQD LLLSYNPWGG SLVELEWEAL
201: RNLTTLDLSH MGLTGTIPEA IASLKRLRYL ALDNNHLSGS VSSGFAALPS LTALYLSGNN LTGKLEFSQE FYQRMGKRFA CWNNPNLCYD AAVSMATGDV
301: LYGVAQCKQD KEAASSNYEA DPFARVDRRN PDHSSGLVAS FWFPAASTGG FWWGIAVEEV VSMVLFAMIL

Best Arabidopsis Sequence Match ( AT1G68780.1 )
(BLAST)

001: MKMLRLRKKQ HLVFLLCVWC LVVDWSKAET EESDGSPMEK TEQAALYSTI QGFVGESWNG SYLYPDPCGW TPIQGVTCDI YDELWYVTAL SFGTMKDNSL
101: ACSESPVIRP QLFELKHLKS LSLFNCFTTP NRYLASISDE KWLDLSKSLE RLEIRSNPGL IGELPSVITN LTNLQSLVVL ENKLTGPLPV NLAKLTRLRR
201: LVLSGNRFTG RIPEVYGLTG LLILDVSRNF LSGALPLSVG GLYSLLKLDL SNNYLEGKLP RELESLKNLT LLDLRNNRLS GGLSKEIQEM TSLVELVLSN
301: NRLAGDLTGI KWRNLKNLVV LDLSNTGLKG EIPGSILELK KLRFLGLSNN NLGGKLIPQM ETEMPSLSAL YVNGNNISGE LEFSRYFYER MGRRLGVWGN
401: PNLCYNGDET KNLSDHVPFG VNQCKRIKAD KY

Arabidopsis Description

At1g68780 [Source:UniProtKB/TrEMBL;Acc:Q9CA41]
SUBAcon: [golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.