Factsheet for VIT_01s0011g02800.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 5
nucleus 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular, nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG92006	Soybean	extracellular, plasma membrane	63.35	64.15
KRH34777	Soybean	extracellular, vacuole	62.94	63.47
KRH70637	Soybean	extracellular, golgi	60.66	62.88
KRH75532	Soybean	extracellular, plasma membrane	60.04	62.37
GSMUA_Achr8P03860_001	Banana	cytosol	44.31	60.11
PGSC0003DMT400002145	Potato	extracellular	56.52	58.46
AT1G13230.1	Thale cress	extracellular	50.93	58.02
CDY19386	Canola	cytosol	48.65	57.6
Solyc05g009990.2.1	Tomato	endoplasmic reticulum, golgi, plasma membrane	55.9	57.57
AT1G68780.1	Thale cress	extracellular, golgi	50.31	56.25
CDX97999	Canola	extracellular	48.86	56.19
GSMUA_Achr9P00780_001	Banana	cytosol	50.72	54.93
CDX95990	Canola	extracellular, vacuole	48.86	54.76
Bra004336.1-P	Field mustard	extracellular, golgi	48.65	54.52
CDY33598	Canola	extracellular, golgi	47.41	53.13
AT3G25670.1	Thale cress	extracellular	52.17	53.05
GSMUA_AchrUn_...	Banana	cytosol	40.58	52.97
GSMUA_Achr10P...	Banana	cytosol	39.13	51.22
CDX83542	Canola	extracellular, plasma membrane, vacuole	50.1	51.16
CDY13577	Canola	vacuole	49.69	50.63
Bra025154.1-P	Field mustard	extracellular, plasma membrane, vacuole	49.48	50.42
Os01t0110800-01	Rice	plasma membrane	45.96	49.33
CDY20429	Canola	cytosol	13.87	46.53
TraesCS3D01G072400.2	Wheat	extracellular, plasma membrane	44.72	44.26
HORVU3Hr1G013160.4	Barley	vacuole	44.51	44.24
KXG32097	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	43.69	44.14
TraesCS3D01G072300.2	Wheat	endoplasmic reticulum, plasma membrane, vacuole	43.89	43.98
KXG32099	Sorghum	plasma membrane	43.48	43.57
TraesCS3A01G072700.2	Wheat	extracellular	44.1	43.47
TraesCS3B01G086700.2	Wheat	extracellular, plasma membrane, vacuole	44.1	43.47
TraesCS3A01G072600.2	Wheat	extracellular	43.69	42.97
Zm00001d040130_P001	Maize	mitochondrion	46.79	42.56
HORVU1Hr1G008420.1	Barley	extracellular	8.9	31.85
VIT_09s0002g07030.t01	Wine grape	plasma membrane	28.57	28.69
VIT_12s0142g00620.t01	Wine grape	cytosol	25.05	28.34
VIT_07s0005g03750.t01	Wine grape	plasma membrane	25.26	26.24
VIT_09s0070g00390.t01	Wine grape	extracellular	16.15	17.03
Bra019819.1-P	Field mustard	nucleus	48.65	15.64

Protein Annotations

EntrezGene:100247391	wikigene:100247391	Gene3D:3.80.10.10	MapMan:35.1	EMBL:AM467489	ProteinID:CAN74874
ProteinID:CAN74874.1	ProteinID:CCB50957	ProteinID:CCB50957.1	UniProt:F6HF27	EMBL:FN595752	GO:GO:0003674
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:IPR001611
InterPro:IPR032675	EntrezGene:LOC100247391	wikigene:LOC100247391	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp
PFAM:PF13855	PRINTS:PR00019	PANTHER:PTHR44325	PANTHER:PTHR44325:SF1	SMART:SM00369	SUPFAM:SSF52058
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0002109B21	ArrayExpress:VIT_01s0011g02800	EnsemblPlantsGene:VIT_01s0011g02800	EnsemblPlants:VIT_01s0011g02800.t01
unigene:Vvi.19678	RefSeq:XP_002278514	RefSeq:XP_002278514.2	RefSeq:XP_002278514.3	SEG:seg	:

Description

No Description!

Coordinates

chr1:-:2489296..2491767

Molecular Weight (calculated)

53120.7 Da

IEP (calculated)

4.590

GRAVY (calculated)

-0.004

Length

483 amino acids

Sequence
(BLAST)

001: MKPFTAIFHT TLVLFILCLG VYCDGDGDTE MAPMVAPMEK TEQEALYSTI QGFVGTWWNG SDLYPDPCGW TPIQGVSCDL YDGFWYVTAL NIGPVQDNSL
101: DCAHNVEFKL HLFELKHLKT LSFLNCFISP RKHPVTIPAN IWYKLAGSLE SLEFRSNPGL VGQVPTGFGD LRKLQSLVLL ENGLSGNLPT IIGNLVSLRR
201: LVIAGNRFTG HIPDNFGGLG ELLILDLSRN SLSGPLPTSF GGLSSLLKLD LSNNQLEGDL PSELGNMKNL TLLDLRNNKF SGGLTQSLQE MASLEDMALS
301: NNPIGGDLLS LEWQNLQNLV ILDLSNTGLT GEVPESLAEL KGLRFLGLND NNLTGNPSPK LAALPSVTAL YLNGNNLTGE LKFSGWFYGK MERRFGAWNN
401: PNLCYPVELM SSSHVPFGVK PCDQEVTYLE PDTRTKLGNE NGNADQNFHF MASLGFSSHA IDGLWWVFLA EISTMILLWN FFS

Best Arabidopsis Sequence Match ( AT1G13230.1 )
(BLAST)

001: MLWQTFFSSL LLLSLLFGCN GDESLPEVTD SEEAPMDKRE REALYSAIQG FVGDSWNGSA LYPDPCGWTP IQGVSCDIYN DLWYVTDLSL GLIYENSLPC
101: SSSLQIRPEL FELKHLRSLS FFNCFISPMV IAKEELWTNF ASNLESLEFR SNPGLIGELP ETIGNLTKLK SLVVLENGFS GELPASICNL KRLKRLVFAG
201: NSFAGMIPNC FKGLKELLIL DLSRNSFSGT LPTSFGDLVS LLKLDLSNNL LEGNLPQELG FLKNLTLLDL RNNRFSGGLS KNIENIQSLT ELVLSNNPMG
301: EEDMVGTNWG KMSNLVVLDL SKMGLRGEIP TSLTNLKRLR FLGLNNNNLT GFVPSKKLEA LPCLGALYIN GNNLTGELRF STKFYEKMGR RFKASKNPNL
401: CQPLEMVMSE SHKHLSPLGV KPCT

Arabidopsis Description

PII-2Piriformospora indica-insensitive protein 2 [Source:UniProtKB/Swiss-Prot;Acc:Q5PP26]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.