CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane

Predictor Summary:

extracellular 5
endoplasmic reticulum 5
vacuole 4
plasma membrane 5
golgi 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, plasma membrane
Any Predictor:	mitochondrion, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	mitochondrion
WoLF PSORT:	endoplasmic reticulum
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KXG32099	Sorghum	plasma membrane	95.82	95.02
Zm00001d040130_P001	Maize	mitochondrion	80.33	72.32
Os01t0110800-01	Rice	plasma membrane	66.32	70.44
HORVU3Hr1G013160.4	Barley	vacuole	64.02	62.96
TraesCS3D01G072400.2	Wheat	extracellular, plasma membrane	64.23	62.91
TraesCS3A01G072700.2	Wheat	extracellular	64.02	62.45
TraesCS3D01G072300.2	Wheat	endoplasmic reticulum, plasma membrane, vacuole	62.13	61.62
TraesCS3B01G086700.2	Wheat	extracellular, plasma membrane, vacuole	62.76	61.22
TraesCS3A01G072600.2	Wheat	extracellular	62.55	60.9
GSMUA_Achr8P03860_001	Banana	cytosol	40.8	54.78
KRH70637	Soybean	extracellular, golgi	44.98	46.14
KRH75532	Soybean	extracellular, plasma membrane	44.56	45.81
CDY19386	Canola	cytosol	38.08	44.61
AT1G68780.1	Thale cress	extracellular, golgi	40.17	44.44
KRG92006	Soybean	extracellular, plasma membrane	44.35	44.44
Solyc05g009990.2.1	Tomato	endoplasmic reticulum, golgi, plasma membrane	43.51	44.35
AT1G13230.1	Thale cress	extracellular	39.33	44.34
CDX97999	Canola	extracellular	38.91	44.29
PGSC0003DMT400002145	Potato	extracellular	43.1	44.11
VIT_01s0011g02800.t01	Wine grape	extracellular	44.14	43.69
KRH34777	Soybean	extracellular, vacuole	43.72	43.63
CDX95990	Canola	extracellular, vacuole	39.12	43.39
Bra004336.1-P	Field mustard	extracellular, golgi	39.12	43.39
CDY33598	Canola	extracellular, golgi	38.91	43.16
CDY20429	Canola	cytosol	12.97	43.06
HORVU1Hr1G008420.1	Barley	extracellular	12.13	42.96
KRH03836	Soybean	extracellular, plasma membrane, vacuole	41.84	42.19
KRH56709	Soybean	extracellular, plasma membrane	41.84	41.93
CDX83542	Canola	extracellular, plasma membrane, vacuole	41.0	41.44
PGSC0003DMT400010384	Potato	cytosol	39.12	41.1
CDY13577	Canola	vacuole	40.59	40.93
Bra025154.1-P	Field mustard	extracellular, plasma membrane, vacuole	40.59	40.93
Solyc06g069290.2.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	39.75	40.86
AT3G25670.1	Thale cress	extracellular	39.12	39.37
EES01095	Sorghum	extracellular, plasma membrane, vacuole	30.13	28.57
EER93755	Sorghum	extracellular, plasma membrane	17.78	17.78
EES01405	Sorghum	extracellular, plasma membrane	17.57	17.72
EES19861	Sorghum	plastid	16.74	16.88
Bra019819.1-P	Field mustard	nucleus	38.91	12.38

Protein Annotations

Gene3D:3.80.10.10	MapMan:35.1	UniProt:A0A1B6Q2E0	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0016020	GO:GO:0016021	InterPro:IPR001611	InterPro:IPR032675	ProteinID:KXG32096.1
EnsemblPlants:KXG32097	ProteinID:KXG32097	ProteinID:KXG32097.1	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	ProteinID:OQU86504.1
PFAM:PF13855	PANTHER:PTHR44325	PANTHER:PTHR44325:SF1	EnsemblPlantsGene:SORBI_3003G100200	SUPFAM:SSF52058	SignalP:SignalP-noTM
TMHMM:TMhelix	UniParc:UPI00081AC259	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr3:+:8805635..8809875

Molecular Weight (calculated)

49491.8 Da

IEP (calculated)

5.045

GRAVY (calculated)

0.194

Length

478 amino acids

Sequence
(BLAST)

001: MRPAGGCCRR GGGLLVLGLA LSLSAALLLR CCAGQQAEDD GSADAPAAAT APMEEKERRA LYAAIESFVG KGWNGSGLYP DPCGWSPIQG VSCDLFNGLW
101: YPTVIGIGPV LDNSLQCAPD AKFSPQLFDL RRLRTLSFYS CFPASNPTAI PTAGWEKLSG TLETLEFRTN PGLTGGIPPS LGRLASLQSL VLVENNLTGP
201: VPAELGALSR LRRLVLSGNG LSGPIPATLG GLTGLLKMDL SNNLLQGSIP PELAGLKSLT LLDLRNNSLT GGLPQFVQGM ASLQDLLLSN NPQLGGALPQ
301: SGWETLAANL ATLDLSNVGL VGAIPANMAK LTGLRFLALD HNRLTGAVPA ELAQLPSIGA LYLNGNNLTG PLEFLAGFYQ RMGQRFASWD NPGLCYNIAA
401: VDVAHAPSGV VVCKDLQEPS VAPDGDGEVE GGRKPEASSS LVASSSSGGS SARVGGLWYL VVVQGMVAAV LGLLSRLL

Best Arabidopsis Sequence Match ( AT1G68780.1 )
(BLAST)

001: MKMLRLRKKQ HLVFLLCVWC LVVDWSKAET EESDGSPMEK TEQAALYSTI QGFVGESWNG SYLYPDPCGW TPIQGVTCDI YDELWYVTAL SFGTMKDNSL
101: ACSESPVIRP QLFELKHLKS LSLFNCFTTP NRYLASISDE KWLDLSKSLE RLEIRSNPGL IGELPSVITN LTNLQSLVVL ENKLTGPLPV NLAKLTRLRR
201: LVLSGNRFTG RIPEVYGLTG LLILDVSRNF LSGALPLSVG GLYSLLKLDL SNNYLEGKLP RELESLKNLT LLDLRNNRLS GGLSKEIQEM TSLVELVLSN
301: NRLAGDLTGI KWRNLKNLVV LDLSNTGLKG EIPGSILELK KLRFLGLSNN NLGGKLIPQM ETEMPSLSAL YVNGNNISGE LEFSRYFYER MGRRLGVWGN
401: PNLCYNGDET KNLSDHVPFG VNQCKRIKAD KY

Arabidopsis Description

At1g68780 [Source:UniProtKB/TrEMBL;Acc:Q9CA41]
SUBAcon: [golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.