Factsheet for PGSC0003DMT400010384

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
extracellular 1
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc06g069290.2.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	91.65	89.68
CDY19386	Canola	cytosol	45.93	51.23
GSMUA_Achr8P03860_001	Banana	cytosol	39.78	50.84
AT1G13230.1	Thale cress	extracellular	47.03	50.47
PGSC0003DMT400002145	Potato	extracellular	51.65	50.32
AT1G68780.1	Thale cress	extracellular, golgi	47.69	50.23
CDX97999	Canola	extracellular	45.93	49.76
Bra004336.1-P	Field mustard	extracellular, golgi	46.59	49.19
CDY33598	Canola	extracellular, golgi	46.37	48.96
CDX95990	Canola	extracellular, vacuole	45.71	48.26
KRH56709	Soybean	extracellular, plasma membrane	49.23	46.96
KRH03836	Soybean	extracellular, plasma membrane, vacuole	48.57	46.62
GSMUA_Achr9P00780_001	Banana	cytosol	45.27	46.19
GSMUA_AchrUn_...	Banana	cytosol	36.7	45.14
AT3G25670.1	Thale cress	extracellular	46.59	44.63
CDX83542	Canola	extracellular, plasma membrane, vacuole	46.15	44.4
CDY13577	Canola	vacuole	45.71	43.88
Bra025154.1-P	Field mustard	extracellular, plasma membrane, vacuole	45.49	43.67
GSMUA_Achr10P...	Banana	cytosol	35.38	43.63
CDY20429	Canola	cytosol	13.63	43.06
Os01t0110800-01	Rice	plasma membrane	42.42	42.89
TraesCS3D01G072300.2	Wheat	endoplasmic reticulum, plasma membrane, vacuole	44.84	42.32
HORVU3Hr1G013160.4	Barley	vacuole	44.4	41.56
TraesCS3B01G086700.2	Wheat	extracellular, plasma membrane, vacuole	44.4	41.22
TraesCS3D01G072400.2	Wheat	extracellular, plasma membrane	43.74	40.78
TraesCS3A01G072700.2	Wheat	extracellular	43.52	40.41
TraesCS3A01G072600.2	Wheat	extracellular	43.52	40.33
KXG32097	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	41.1	39.12
KXG32099	Sorghum	plasma membrane	41.1	38.8
Zm00001d040130_P001	Maize	mitochondrion	44.62	38.23
PGSC0003DMT400026717	Potato	cytosol	29.45	31.68
PGSC0003DMT400054822	Potato	plasma membrane	30.77	30.77
PGSC0003DMT400073695	Potato	cytosol	29.89	29.63
HORVU1Hr1G008420.1	Barley	extracellular	7.91	26.67
Bra019819.1-P	Field mustard	nucleus	45.05	13.64

Protein Annotations

EnsemblPlants:PGSC0003DMT400010384	EnsemblPlantsGene:PGSC0003DMG400004056	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PANTHER:PTHR44325
PANTHER:PTHR44325:SF1	PFAM:PF00560	PFAM:PF13855	PGSC:PGSC0003DMG400004056	SMART:SM00369	SUPFAM:SSF52058
UniParc:UPI0002950A8D	UniProt:M0ZXY2	MapMan:11.10.2.3.3	:	:	:

Description

Serine-threonine protein kinase, plant-type [Source:PGSC_GENE;Acc:PGSC0003DMG400004056]

Coordinates

chr6:+:51044810..51047196

Molecular Weight (calculated)

50668.6 Da

IEP (calculated)

6.095

GRAVY (calculated)

-0.153

Length

455 amino acids

Sequence
(BLAST)

001: MYRGVADASI SPMEKHEKEA LYSAIQGFVG NEWNGSFLYP DPCGWTSIEG VSCDFSNGFW HVTDLTIGDL YDNSLRCSQA AEFTEHLFNL KHLKRLSFSN
101: CFLSDQHKSI PISNWDSLAN SLESLEFRSN PGLIGTIPTS FGYLKNLQSL VLLENGLKGE IPEALGNLTK LKRLVLAGNN FIGPIPTSLG RLTNLLILDT
201: SRNFLSGALP VTIGDLSSLI KVDLSNNRLD GKLPREIGGL KSLTLLDLSH NNFSDGLPET FQEMDSLEEL VLSDNPIGDY VTRIQWRNMK NLEMLDLSNM
301: GLKGNIPNSM TEMKKLRFLS LSNNILSGII PSKFEKISTI NALYLDGNDF TGKLEFSQRF YTKLRSRFRA SGNVKLCLSL ELTSTSHVPE GVKQCEQEST
401: VDSKESDSNL KNEDLSQNSH HIIASLGHSG HVVSHFTFCY VARIILMSLP WIVFL

Best Arabidopsis Sequence Match ( AT3G25670.1 )
(BLAST)

001: MSWIHLVLFL CLTLLCCVTG ELSPEGTDDG APMEKTEQEA LYSAIQGFVG DSWNGSDLYP DPCGWTPIQG VSCDLYGDLW YVTDLTLGLV HENSLSCATS
101: LEIKPQLFKL KHLKSLTFFN CFTSPIRIPK EDWINLASNL ESLEFRSNPG LIGELPETIG SLTKLKSLVV LENGFNGKLP TRICNLTRLK RLVLAGNLFT
201: GTIPDCFNGF KDLLILDMSR NSFSGILPLS VGEMVSLLKL DLSNNQLEGR LPQEIGFLKN LTLLDLRNNR ISGGLFENIE KIPSLTDLVL SGNPMGSDDM
301: MGIKWENMGN LVILDLSKMG LRGEVPLGLT SLRRLRFLGL NDNNLTGTVP SKELETLPCL GALYINGNNL SGELRFSRKF YEKMGTRFKA SKNPNLCQDV
401: VSESRQYVVG LKSCMMEKAE DSLVIKQTWS NLKKEDESSS SMGVMVTRHV LLSNGFMWDL LLELSLILLL NLLVC

Arabidopsis Description

Leucine-rich repeat (LRR) family protein [Source:UniProtKB/TrEMBL;Acc:F4JA38]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.