Factsheet for TraesCS3A01G072700.2

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G072600.2	Wheat	extracellular	89.18	89.0
HORVU3Hr1G013160.4	Barley	vacuole	86.53	87.24
TraesCS3B01G086700.2	Wheat	extracellular, plasma membrane, vacuole	84.08	84.08
TraesCS3D01G072300.2	Wheat	endoplasmic reticulum, plasma membrane, vacuole	82.04	83.4
Os01t0110800-01	Rice	plasma membrane	59.59	64.89
KXG32097	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	62.45	64.02
KXG32099	Sorghum	plasma membrane	61.84	62.86
Zm00001d040130_P001	Maize	mitochondrion	64.29	59.32
GSMUA_Achr8P03860_001	Banana	cytosol	42.65	58.71
HORVU1Hr1G008420.1	Barley	extracellular	15.31	55.56
CDY19386	Canola	cytosol	37.55	45.1
KRH75532	Soybean	extracellular, plasma membrane	42.65	44.95
KRH70637	Soybean	extracellular, golgi	42.65	44.85
AT1G13230.1	Thale cress	extracellular	38.78	44.81
Solyc05g009990.2.1	Tomato	endoplasmic reticulum, golgi, plasma membrane	42.86	44.78
PGSC0003DMT400002145	Potato	extracellular	42.65	44.75
Bra004336.1-P	Field mustard	extracellular, golgi	39.18	44.55
AT1G68780.1	Thale cress	extracellular, golgi	39.18	44.44
KRG92006	Soybean	extracellular, plasma membrane	43.06	44.23
VIT_01s0011g02800.t01	Wine grape	extracellular	43.47	44.1
CDX95990	Canola	extracellular, vacuole	38.78	44.08
CDX97999	Canola	extracellular	37.55	43.81
PGSC0003DMT400010384	Potato	cytosol	40.41	43.52
KRH56709	Soybean	extracellular, plasma membrane	42.24	43.4
Solyc06g069290.2.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	41.02	43.23
CDY33598	Canola	extracellular, golgi	37.96	43.16
KRH03836	Soybean	extracellular, plasma membrane, vacuole	41.63	43.04
KRH34777	Soybean	extracellular, vacuole	42.04	43.01
AT3G25670.1	Thale cress	extracellular	40.41	41.68
CDY13577	Canola	vacuole	40.0	41.35
CDX83542	Canola	extracellular, plasma membrane, vacuole	39.8	41.23
Bra025154.1-P	Field mustard	extracellular, plasma membrane, vacuole	39.59	40.93
CDY20429	Canola	cytosol	11.02	37.5
TraesCS2A01G357100.1	Wheat	plasma membrane	30.0	30.31
TraesCS1A01G350800.1	Wheat	extracellular, plasma membrane	15.51	17.39
TraesCS5A01G374600.2	Wheat	extracellular, vacuole	15.92	16.92
TraesCS3A01G282900.1	Wheat	extracellular, plasma membrane	14.9	16.19
Bra019819.1-P	Field mustard	nucleus	37.35	12.18

Protein Annotations

EnsemblPlants:TraesCS3A01G072700.2	EnsemblPlantsGene:TraesCS3A01G072700	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PANTHER:PTHR44325
PANTHER:PTHR44325:SF1	PFAM:PF00560	PFAM:PF13855	PFscan:PS51257	SEG:seg	SignalP:SignalP-noTM
SMART:SM00369	SUPFAM:SSF52058	MapMan:35.1	:	:	:

Description

No Description!

Coordinates

chr3A:-:44764194..44766682

Molecular Weight (calculated)

51172.9 Da

IEP (calculated)

5.126

GRAVY (calculated)

0.093

Length

490 amino acids

Sequence
(BLAST)

001: MGRARGGRLL PVLAALFVAL LLISGCAAEG EDEEGSPVPA EEPEAPMEDK EKAALYAAIG SFVGKAWNGS GLFPDPCGQT PIQGVSCDLF NGVWYPTVVS
101: IGPVLDNSLQ CAPDARFSPQ LFDLRRLKSL TFYACFPAAN PTTIPAASWD KLSGTLETLE FRSNPGLSGA IPASLGRLAS LRSLVLVDNN LTGAVPSELG
201: GLAKLRRLVL SGNGLSGPVP ATLGNNNPQL RRLDNEQLLI VDMSKNSLTG SLPPSLGGLK GLLKMDLSNN RLDGRIPPEL AGLESLTLLD LRNNSLTGGL
301: PDFVLAMPAL QDLLLSSNPL LGGTLMQRGW EKMASLATLD LSNVGLAGAI PESMAAMPRL RFLALDHNRL SGTVPAKLAA LPSIGAMYLN GNNLTGALEF
401: SARFYQRMGS RFASWDNPGL CTAETAGGAP TGVAVCKDAQ DPPRVGVRDG MDGGGRRPEA SSSLPASSSS SAMVAVLWWS VLAQGMAMAL

Best Arabidopsis Sequence Match ( AT3G25670.1 )
(BLAST)

001: MSWIHLVLFL CLTLLCCVTG ELSPEGTDDG APMEKTEQEA LYSAIQGFVG DSWNGSDLYP DPCGWTPIQG VSCDLYGDLW YVTDLTLGLV HENSLSCATS
101: LEIKPQLFKL KHLKSLTFFN CFTSPIRIPK EDWINLASNL ESLEFRSNPG LIGELPETIG SLTKLKSLVV LENGFNGKLP TRICNLTRLK RLVLAGNLFT
201: GTIPDCFNGF KDLLILDMSR NSFSGILPLS VGEMVSLLKL DLSNNQLEGR LPQEIGFLKN LTLLDLRNNR ISGGLFENIE KIPSLTDLVL SGNPMGSDDM
301: MGIKWENMGN LVILDLSKMG LRGEVPLGLT SLRRLRFLGL NDNNLTGTVP SKELETLPCL GALYINGNNL SGELRFSRKF YEKMGTRFKA SKNPNLCQDV
401: VSESRQYVVG LKSCMMEKAE DSLVIKQTWS NLKKEDESSS SMGVMVTRHV LLSNGFMWDL LLELSLILLL NLLVC

Arabidopsis Description

Leucine-rich repeat (LRR) family protein [Source:UniProtKB/TrEMBL;Acc:F4JA38]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.