Factsheet for Solyc06g069290.2.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, extracellular, plasma membrane

Predictor Summary:

extracellular 7
endoplasmic reticulum 6
vacuole 5
plasma membrane 6
golgi 5
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, extracellular, plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	extracellular, nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400010384	Potato	cytosol	89.68	91.65
AT1G13230.1	Thale cress	extracellular	47.1	51.65
CDY19386	Canola	cytosol	45.16	51.47
GSMUA_Achr8P03860_001	Banana	cytosol	39.35	51.4
AT1G68780.1	Thale cress	extracellular, golgi	47.53	51.16
Solyc05g009990.2.1	Tomato	endoplasmic reticulum, golgi, plasma membrane	51.4	50.96
Bra004336.1-P	Field mustard	extracellular, golgi	46.67	50.35
CDX97999	Canola	extracellular	45.38	50.24
CDY33598	Canola	extracellular, golgi	46.45	50.12
CDX95990	Canola	extracellular, vacuole	45.16	48.72
KRH56709	Soybean	extracellular, plasma membrane	49.25	48.01
KRH03836	Soybean	extracellular, plasma membrane, vacuole	48.39	47.47
GSMUA_Achr9P00780_001	Banana	cytosol	44.73	46.64
GSMUA_AchrUn_...	Banana	cytosol	36.99	46.49
CDX83542	Canola	extracellular, plasma membrane, vacuole	46.24	45.45
AT3G25670.1	Thale cress	extracellular	46.24	45.26
CDY13577	Canola	vacuole	45.81	44.94
Bra025154.1-P	Field mustard	extracellular, plasma membrane, vacuole	45.59	44.73
GSMUA_Achr10P...	Banana	cytosol	35.05	44.17
Os01t0110800-01	Rice	plasma membrane	42.58	44.0
TraesCS3D01G072300.2	Wheat	endoplasmic reticulum, plasma membrane, vacuole	45.16	43.57
CDY20429	Canola	cytosol	13.33	43.06
TraesCS3B01G086700.2	Wheat	extracellular, plasma membrane, vacuole	45.16	42.86
HORVU3Hr1G013160.4	Barley	vacuole	44.3	42.39
TraesCS3D01G072400.2	Wheat	extracellular, plasma membrane	43.87	41.8
TraesCS3A01G072600.2	Wheat	extracellular	43.87	41.55
TraesCS3A01G072700.2	Wheat	extracellular	43.23	41.02
KXG32097	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	40.86	39.75
KXG32099	Sorghum	plasma membrane	40.86	39.42
Zm00001d040130_P001	Maize	mitochondrion	44.95	39.36
Solyc10g007830.1.1	Tomato	endoplasmic reticulum, plasma membrane, vacuole	30.32	31.9
Solyc09g072630.2.1	Tomato	extracellular	29.68	31.87
Solyc12g042760.1.1	Tomato	plasma membrane	30.54	29.65
HORVU1Hr1G008420.1	Barley	extracellular	8.39	28.89
Bra019819.1-P	Field mustard	nucleus	45.16	13.97

Protein Annotations

EnsemblPlants:Solyc06g069290.2.1	EnsemblPlantsGene:Solyc06g069290.2	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PANTHER:PTHR44325
PANTHER:PTHR44325:SF1	PFAM:PF13855	PRINTS:PR00019	SEG:seg	SignalP:SignalP-noTM	SMART:SM00369
SUPFAM:SSF52058	UniParc:UPI0002766968	UniProt:K4C8A2	MapMan:11.10.2.3.3	:	:

Description

No Description!

Coordinates

chr6:+:43056577..43058291

Molecular Weight (calculated)

51922.7 Da

IEP (calculated)

7.571

GRAVY (calculated)

-0.082

Length

465 amino acids

Sequence
(BLAST)

001: MLLQLVLVGV YIVMYKGVAD ASISPMEKHE KEALYSAIQG FVGNEWNGSF LYPDPCGWTT IQGVSCDFSN GLWHVTDLTI GDLYDNSLRC SQAAKFTEHL
101: FKLKHLKRLF FSNCFLSDQH KSIPISNWDS LANSLESLEF RSNPGLIGTI PTSFGYLKNL QSLVLLENEL KGEIPEALGN LTKLKRLVLA GNNFIGPIPT
201: SLGRLTNLLI LDTSRNFLSG ALPVTIGDLS SLIKLDLSNN RLHGKLPREI GGLKSLTLLD LSHNNFSDGL PQTIQEMDSL QQLVLSDNPI GDYVTRIQWR
301: NMKNLEMLDL SNMGLKGNIP NSMTEMKKLR FLSLSNNVLS GTIPSKFEKI STINALYLDG NDFTGKLEFS QRFYTKLRSR FRASGNVKLC LSLELTSTSH
401: VPEGVKQCEQ DNTVDSKDSD SNLKYDQNSQ HIIVSLGHSG HVVSRFTFCY VARIILMSLP WVVFL

Best Arabidopsis Sequence Match ( AT3G25670.1 )
(BLAST)

001: MSWIHLVLFL CLTLLCCVTG ELSPEGTDDG APMEKTEQEA LYSAIQGFVG DSWNGSDLYP DPCGWTPIQG VSCDLYGDLW YVTDLTLGLV HENSLSCATS
101: LEIKPQLFKL KHLKSLTFFN CFTSPIRIPK EDWINLASNL ESLEFRSNPG LIGELPETIG SLTKLKSLVV LENGFNGKLP TRICNLTRLK RLVLAGNLFT
201: GTIPDCFNGF KDLLILDMSR NSFSGILPLS VGEMVSLLKL DLSNNQLEGR LPQEIGFLKN LTLLDLRNNR ISGGLFENIE KIPSLTDLVL SGNPMGSDDM
301: MGIKWENMGN LVILDLSKMG LRGEVPLGLT SLRRLRFLGL NDNNLTGTVP SKELETLPCL GALYINGNNL SGELRFSRKF YEKMGTRFKA SKNPNLCQDV
401: VSESRQYVVG LKSCMMEKAE DSLVIKQTWS NLKKEDESSS SMGVMVTRHV LLSNGFMWDL LLELSLILLL NLLVC

Arabidopsis Description

Leucine-rich repeat (LRR) family protein [Source:UniProtKB/TrEMBL;Acc:F4JA38]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.