Factsheet for Solyc09g072630.2.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 6
golgi 5
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular, nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400026717	Potato	cytosol	80.37	82.27
VIT_07s0005g03750.t01	Wine grape	plasma membrane	56.12	52.26
CDY35199	Canola	extracellular, plasma membrane	49.65	48.75
Bra011040.1-P	Field mustard	extracellular, plasma membrane	48.96	48.07
AT4G28560.1	Thale cress	extracellular, vacuole	49.19	47.33
CDY38378	Canola	extracellular	48.5	47.3
KRH19593	Soybean	extracellular, plasma membrane	43.65	44.16
KRH32220	Soybean	extracellular, plasma membrane, vacuole	45.03	43.72
GSMUA_AchrUn_...	Banana	extracellular, plasma membrane	43.88	41.13
Os06t0627500-01	Rice	extracellular	34.87	34.09
Solyc05g009990.2.1	Tomato	endoplasmic reticulum, golgi, plasma membrane	32.33	29.85
Solyc06g069290.2.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	31.87	29.68
Solyc10g007830.1.1	Tomato	endoplasmic reticulum, plasma membrane, vacuole	29.56	28.96
Solyc12g042760.1.1	Tomato	plasma membrane	31.64	28.6

Protein Annotations

Gene3D:3.80.10.10	MapMan:35.1	GO:GO:0000003	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0008150	GO:GO:0009653	GO:GO:0009856
GO:GO:0009860	GO:GO:0009987	GO:GO:0016020	GO:GO:0016043	GO:GO:0016049	GO:GO:0016324
GO:GO:0030154	GO:GO:0040007	InterPro:IPR001611	InterPro:IPR032675	UniProt:K4CUT9	InterPro:LRR_dom_sf
InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF00560	PFAM:PF13855	PRINTS:PR00019	PANTHER:PTHR44325
PANTHER:PTHR44325:SF3	SMART:SM00365	SMART:SM00369	SUPFAM:SSF52058	EnsemblPlantsGene:Solyc09g072630.2	EnsemblPlants:Solyc09g072630.2.1
TMHMM:TMhelix	UniParc:UPI000276AF79	:	:	:	:

Description

No Description!

Coordinates

chr9:+:65256774..65258919

Molecular Weight (calculated)

47556.6 Da

IEP (calculated)

4.758

GRAVY (calculated)

0.114

Length

433 amino acids

Sequence
(BLAST)

001: MAFFSKLSVL VLYLCFYANL IIFAVSQPSA LNIVEQEAVY NVLESINSDV SWRSLFPDDL CSSSPHGVIC DYFVSTTNSF TPHVTEISLG YVSDYAPNPP
101: CTPNSTLNAS LFAPFSYLRK IFVYKCFTEN EVSLIDFGSL PSSLEEVVFL ENPGLVGSVS DKVGSLMSLR RLVLSGSGVC GEIPYGVGGL VNLEQLTLSR
201: NKISGEIPVG LMTLKKLKIL DLSQNELESS VLEPIGNLTQ LLKLDLSYNK LTGKIPQSLK GLKSLEFLDL SYNNFSMPGV PLFLAEMSSL KEVYLSGNFL
301: GGEIPEIWEN LEGIVGLGLS KTGLIGNIPV SMGVYLKNIC YLGLDNNKLE GALPEEFGAL DYVNELHLEN NNLSGRLPFS PKFVSKVGEK LKLGGNPQLC
401: VDQGLRIPNC INDKKSYYPW KNLLRSKCDM DTR

Best Arabidopsis Sequence Match ( AT4G28560.1 )
(BLAST)

001: MASFTNLSLL LLFLFTATLI TSQQSDDDEN ASPQLALDPS EQEAVYRVLD SVNSAISWRT IFPDDICASP PDGVVCDNLY ASQNGVATSV HVTEFHLGYL
101: SDYTQNPPCS SNATLDPLLF TAFKHLRKLF FYKCFTDARA SLPLTVPEDF GSVLEELVFI ENPSLVGEIG AMIGNFTKLR RLVLTGNGFH GSIPGQIGDL
201: VSLEEITLSR NSLTGGFPAN ATSRLKNLKV LDFSHNFING NAPDSIGDLT ELLKLDLSFN EFTGEVPSGV GNLKKLVFLD LSYNRFGNFG VPLFLAEMSS
301: LREVHLSGNK LGGRIPAIWK NLEGISGIGF SRMGLEGNIP ASMGSSLKNL CFLALDNNNL DGQIPEEFGF LDSAREINLE NNNLTGKAPF SDSFRDRIGK
401: KLKLSGNVNL QVKNSDPHLA GRALYSSARK VLPLIYFPAT LLALYISITQ

Arabidopsis Description

RIC7ROP-interactive CRIB motif-containing protein 7 [Source:UniProtKB/TrEMBL;Acc:F4JLB7]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.