Factsheet for Bra011040.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 5
golgi 4
plastid 2
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	secretory
iPSORT:	plastid
MultiLoc:	extracellular
Plant-mPloc:	extracellular, nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY35199	Canola	extracellular, plasma membrane	91.84	91.84
AT4G28560.1	Thale cress	extracellular, vacuole	75.06	73.56
PGSC0003DMT400026717	Potato	cytosol	48.07	50.12
Solyc09g072630.2.1	Tomato	extracellular	48.07	48.96
VIT_07s0005g03750.t01	Wine grape	plasma membrane	49.89	47.31
KRH32220	Soybean	extracellular, plasma membrane, vacuole	47.39	46.86
KRH19593	Soybean	extracellular, plasma membrane	42.18	43.46
GSMUA_AchrUn_...	Banana	extracellular, plasma membrane	43.76	41.77
Os06t0627500-01	Rice	extracellular	32.65	32.51
Bra004719.1-P	Field mustard	extracellular, plasma membrane, vacuole	31.07	30.18
Bra004336.1-P	Field mustard	extracellular, golgi	28.57	29.23
Bra025154.1-P	Field mustard	extracellular, plasma membrane, vacuole	30.61	28.48
Bra003549.1-P	Field mustard	extracellular	30.84	27.36
Bra003550.1-P	Field mustard	extracellular	5.44	19.35
Bra019819.1-P	Field mustard	nucleus	30.39	8.92

Protein Annotations

Gene3D:3.80.10.10	MapMan:35.1	EnsemblPlantsGene:Bra011040	EnsemblPlants:Bra011040.1	EnsemblPlants:Bra011040.1-P	GO:GO:0000003
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0005623	GO:GO:0005886
GO:GO:0008150	GO:GO:0009653	GO:GO:0009856	GO:GO:0009860	GO:GO:0009987	GO:GO:0016020
GO:GO:0016021	GO:GO:0016043	GO:GO:0016049	GO:GO:0016324	GO:GO:0030154	GO:GO:0040007
InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	UniProt:M4D3I6
PFAM:PF13855	PANTHER:PTHR44325	PANTHER:PTHR44325:SF3	SMART:SM00369	SUPFAM:SSF52058	SignalP:SignalP-noTM
TMHMM:TMhelix	UniParc:UPI0002545AD4	SEG:seg	:	:	:

Description

AT4G28560 (E=7e-181) RIC7 | RIC7 (ROP-INTERACTIVE CRIB MOTIF-CONTAINING PROTEIN 7); protein binding

Coordinates

chrA01:+:4285546..4286871

Molecular Weight (calculated)

48110.7 Da

IEP (calculated)

5.252

GRAVY (calculated)

0.023

Length

441 amino acids

Sequence
(BLAST)

001: MATSHLHLFL FFLFTAPSTV CQENNDYAPP QLPPSEQEAV YRVLNSVNPS IPWRTTFPDD LCASPSDGVV CDYPDASSST SLHVTELHLG YVSDYTQNPP
101: CSSNSTLDPL LFTSFKHLRK LFFYKCFTGA PASLPETIPE EFGSVLEELV FIENPSLSGD VGVLIGNFTK LRRLVLTGNG FHGSIPNRIS GLVSLEEITL
201: SRNSLTGGFP ATSRLKNLKV LDFSHNSLTG NAPDSIGDLT ELLKLDLSYN AFSGEIPPGV GKLKKLEFLD LSYNRFGNYG VPLFLAEMPS LKEVYLSGNL
301: LGGRIPEIWR NLEGISGIGF SRMGLHGNIP ASMGSSLKSL WYLALDNNNL EGSIPIEFGL LDSAREINLE NNNLTGQAPF SDGFRDRVGK KLKLSGNPYL
401: LLVKESVPPL AGEVLSSSAV RALASVCFPA VFMVLYILMK Q

Best Arabidopsis Sequence Match ( AT4G28560.1 )
(BLAST)

001: MASFTNLSLL LLFLFTATLI TSQQSDDDEN ASPQLALDPS EQEAVYRVLD SVNSAISWRT IFPDDICASP PDGVVCDNLY ASQNGVATSV HVTEFHLGYL
101: SDYTQNPPCS SNATLDPLLF TAFKHLRKLF FYKCFTDARA SLPLTVPEDF GSVLEELVFI ENPSLVGEIG AMIGNFTKLR RLVLTGNGFH GSIPGQIGDL
201: VSLEEITLSR NSLTGGFPAN ATSRLKNLKV LDFSHNFING NAPDSIGDLT ELLKLDLSFN EFTGEVPSGV GNLKKLVFLD LSYNRFGNFG VPLFLAEMSS
301: LREVHLSGNK LGGRIPAIWK NLEGISGIGF SRMGLEGNIP ASMGSSLKNL CFLALDNNNL DGQIPEEFGF LDSAREINLE NNNLTGKAPF SDSFRDRIGK
401: KLKLSGNVNL QVKNSDPHLA GRALYSSARK VLPLIYFPAT LLALYISITQ

Arabidopsis Description

RIC7ROP-interactive CRIB motif-containing protein 7 [Source:UniProtKB/TrEMBL;Acc:F4JLB7]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.