Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane, extracellular, vacuole
Predictor Summary:
Predictor Summary:
- nucleus 1
- extracellular 5
- endoplasmic reticulum 4
- vacuole 5
- plasma membrane 5
- golgi 4
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| KRH19593 | Soybean | extracellular, plasma membrane | 65.02 | 67.76 |
| Bra011040.1-P | Field mustard | extracellular, plasma membrane | 46.86 | 47.39 |
| PGSC0003DMT400026717 | Potato | cytosol | 44.84 | 47.28 |
| CDY38378 | Canola | extracellular | 46.64 | 46.85 |
| CDY35199 | Canola | extracellular, plasma membrane | 45.74 | 46.26 |
| VIT_07s0005g03750.t01 | Wine grape | plasma membrane | 47.09 | 45.16 |
| Solyc09g072630.2.1 | Tomato | extracellular | 43.72 | 45.03 |
| AT4G28560.1 | Thale cress | extracellular, vacuole | 45.29 | 44.89 |
| GSMUA_AchrUn_... | Banana | extracellular, plasma membrane | 39.24 | 37.88 |
| Os06t0627500-01 | Rice | extracellular | 30.49 | 30.7 |
| KRH34777 | Soybean | extracellular, vacuole | 26.23 | 24.43 |
| KRH70637 | Soybean | extracellular, golgi | 25.34 | 24.25 |
| KRG92006 | Soybean | extracellular, plasma membrane | 25.78 | 24.11 |
| KRH75532 | Soybean | extracellular, plasma membrane | 24.89 | 23.87 |
| KRH23585 | Soybean | extracellular, plasma membrane, vacuole | 26.01 | 23.67 |
| KRH03836 | Soybean | extracellular, plasma membrane, vacuole | 25.11 | 23.63 |
| KRH56709 | Soybean | extracellular, plasma membrane | 25.11 | 23.48 |
| KRH58668 | Soybean | cytosol | 10.31 | 15.08 |
| KRH42561 | Soybean | cytosol | 14.35 | 14.51 |
| KRH11174 | Soybean | plasma membrane | 13.23 | 12.45 |
| KRH21079 | Soybean | extracellular | 13.9 | 12.2 |
Protein Annotations
| Gene3D:3.80.10.10 | MapMan:35.1 | UniProt:A0A0R0HP23 | EMBL:ACUP02006105 | EnsemblPlantsGene:GLYMA_10G038800 | GO:GO:0003674 |
| GO:GO:0005488 | GO:GO:0005515 | GO:GO:0005575 | GO:GO:0016020 | GO:GO:0016021 | InterPro:IPR001611 |
| InterPro:IPR032675 | EnsemblPlants:KRH32220 | ProteinID:KRH32220 | ProteinID:KRH32220.1 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt |
| PFAM:PF00560 | PFscan:PS51450 | PANTHER:PTHR44325 | PANTHER:PTHR44325:SF3 | SUPFAM:SSF52058 | SignalP:SignalP-noTM |
| TMHMM:TMhelix | UniParc:UPI0006EE1503 | SEG:seg | : | : | : |
Description
hypothetical protein
Coordinates
chr10:+:3442645..3444014
Molecular Weight (calculated)
48933.2 Da
IEP (calculated)
6.773
GRAVY (calculated)
0.160
Length
446 amino acids
Sequence
(BLAST)
(BLAST)
001: MCGSHVLWTM MFSFVIVTST FFSLSHQQQQ QPPLDPSEQN ALYDVLHSLN PTIPWRNLFP DDLCLSAPHG VVCDFPTHQN ETPHVVELSF GYVSDETPNP
101: PCSLNATLNN PLISTSFPYL RKLFFYNCFN KTLPPPLSLP SSLEELVFIN NPSFVAALDT FLQNLTSLRR LILIGNSFHG EVPFYIGGFL NLEEVTLSRN
201: NLSGKIPASL GLLRKNLKVL DLSGNNLSQC LPHSLGNLSQ LLKLDLSFNA FGCRIPENLR GFNRFGNFGV PLFLGEIPTL KEVYLSGNFL SGVIPDIWEN
301: LGGVEKLGFS EMGLVGNIPA SMGVHLKKLS YIGLDNNNLD GSVPYGLLQY ASEINLENNK LSGRVELFST TTKVGQKVKL AGNKGLCVDN KVVGGGVLGQ
401: QQLKACKKTD VPDAVVFSGT SSLLLRFYSL AGVVVVVFFV FIFTGF
101: PCSLNATLNN PLISTSFPYL RKLFFYNCFN KTLPPPLSLP SSLEELVFIN NPSFVAALDT FLQNLTSLRR LILIGNSFHG EVPFYIGGFL NLEEVTLSRN
201: NLSGKIPASL GLLRKNLKVL DLSGNNLSQC LPHSLGNLSQ LLKLDLSFNA FGCRIPENLR GFNRFGNFGV PLFLGEIPTL KEVYLSGNFL SGVIPDIWEN
301: LGGVEKLGFS EMGLVGNIPA SMGVHLKKLS YIGLDNNNLD GSVPYGLLQY ASEINLENNK LSGRVELFST TTKVGQKVKL AGNKGLCVDN KVVGGGVLGQ
401: QQLKACKKTD VPDAVVFSGT SSLLLRFYSL AGVVVVVFFV FIFTGF
001: MASFTNLSLL LLFLFTATLI TSQQSDDDEN ASPQLALDPS EQEAVYRVLD SVNSAISWRT IFPDDICASP PDGVVCDNLY ASQNGVATSV HVTEFHLGYL
101: SDYTQNPPCS SNATLDPLLF TAFKHLRKLF FYKCFTDARA SLPLTVPEDF GSVLEELVFI ENPSLVGEIG AMIGNFTKLR RLVLTGNGFH GSIPGQIGDL
201: VSLEEITLSR NSLTGGFPAN ATSRLKNLKV LDFSHNFING NAPDSIGDLT ELLKLDLSFN EFTGEVPSGV GNLKKLVFLD LSYNRFGNFG VPLFLAEMSS
301: LREVHLSGNK LGGRIPAIWK NLEGISGIGF SRMGLEGNIP ASMGSSLKNL CFLALDNNNL DGQIPEEFGF LDSAREINLE NNNLTGKAPF SDSFRDRIGK
401: KLKLSGNVNL QVKNSDPHLA GRALYSSARK VLPLIYFPAT LLALYISITQ
101: SDYTQNPPCS SNATLDPLLF TAFKHLRKLF FYKCFTDARA SLPLTVPEDF GSVLEELVFI ENPSLVGEIG AMIGNFTKLR RLVLTGNGFH GSIPGQIGDL
201: VSLEEITLSR NSLTGGFPAN ATSRLKNLKV LDFSHNFING NAPDSIGDLT ELLKLDLSFN EFTGEVPSGV GNLKKLVFLD LSYNRFGNFG VPLFLAEMSS
301: LREVHLSGNK LGGRIPAIWK NLEGISGIGF SRMGLEGNIP ASMGSSLKNL CFLALDNNNL DGQIPEEFGF LDSAREINLE NNNLTGKAPF SDSFRDRIGK
401: KLKLSGNVNL QVKNSDPHLA GRALYSSARK VLPLIYFPAT LLALYISITQ
Arabidopsis Description
RIC7ROP-interactive CRIB motif-containing protein 7 [Source:UniProtKB/TrEMBL;Acc:F4JLB7]
SUBAcon: [extracellular,vacuole]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.