CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 3
cytosol 2
extracellular 2
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	nucleus
MultiLoc:	cytosol
Plant-mPloc:	extracellular, nucleus
PProwler:	secretory
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH58668	Soybean	cytosol	51.02	73.77
KRH11174	Soybean	plasma membrane	69.84	64.98
KRH21079	Soybean	extracellular	66.89	58.07
VIT_09s0070g00390.t01	Wine grape	extracellular	48.07	46.29
EER93755	Sorghum	extracellular, plasma membrane	44.67	41.21
GSMUA_Achr7P01190_001	Banana	extracellular	41.95	41.11
TraesCS5D01G384300.1	Wheat	plasma membrane	41.95	40.57
TraesCS5A01G374600.2	Wheat	extracellular, vacuole	42.4	40.56
TraesCS5B01G376600.1	Wheat	plasma membrane	41.72	40.17
Zm00001d033230_P001	Maize	extracellular, vacuole	42.86	39.79
HORVU5Hr1G092930.2	Barley	plasma membrane	42.4	37.25
KRG92006	Soybean	extracellular, plasma membrane	19.05	17.61
KRH75532	Soybean	extracellular, plasma membrane	18.37	17.42
KRH34777	Soybean	extracellular, vacuole	18.82	17.33
KRH70637	Soybean	extracellular, golgi	17.91	16.95
KRH03836	Soybean	extracellular, plasma membrane, vacuole	16.1	14.98
KRH19593	Soybean	extracellular, plasma membrane	14.29	14.72
KRH32220	Soybean	extracellular, plasma membrane, vacuole	14.51	14.35
KRH56709	Soybean	extracellular, plasma membrane	15.42	14.26
KRH23585	Soybean	extracellular, plasma membrane, vacuole	14.51	13.06

Protein Annotations

Gene3D:3.80.10.10	MapMan:35.1	EMBL:ACUP02004815	EnsemblPlantsGene:GLYMA_08G097400	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR001611	InterPro:IPR032675	UniProt:K7L5S7	EnsemblPlants:KRH42561	ProteinID:KRH42561
ProteinID:KRH42561.1	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF00560	PFAM:PF13855
PRINTS:PR00019	PANTHER:PTHR44325	PANTHER:PTHR44325:SF2	SMART:SM00369	SUPFAM:SSF52058	UniParc:UPI0002337E28
SEG:seg	:	:	:	:	:

Description

hypothetical protein

Coordinates

chr8:-:7446155..7447480

Molecular Weight (calculated)

48122.2 Da

IEP (calculated)

5.603

GRAVY (calculated)

0.003

Length

441 amino acids

Sequence
(BLAST)

001: MVMEEEELLG LFEVMDALLE DPYWAQAHPK PCTDTPWPGV ECELGSNNQQ IFHVTKIHIG PDIVFPFSPC KPSAYLSHSL LKLKYIKTLS IFNCFVASPV
101: TLPKTLFGPF SSLEHLALEN NPSLYGEIPT SLGGVAGLRV LSLSQNSLQG NIPSQIGGLV SLEQLDLSYN NLSGQIPKEI GGLKSMTILD LSCNAVEGFL
201: PCSLGKLQLL QKMDLHSNRL SENIPPDIGN LKRLVLLDLS HNFIVGPISE TFSSLDLLEY LLIDDNPIKG GIPQFIGKLK KLKSLSLSGC GLTGSIPYSF
301: SSLKNLTALS LGNNSLIGQV PPNLGSLPSL DQLNISHNKL SGVLELPGDF IQKLGKRLDL RGNSELCIND QSKKKNLSSY LEIPSCLNTR QRNDDNYFAG
401: GPLQDLSGLK PSWYDSNPSS CSSWPNDLHV IIFTLVLNLV I

Best Arabidopsis Sequence Match ( AT2G42800.1 )
(BLAST)

001: MTMKRALPSP SSLLFFFLLI TPLFLCQENR VSASMPPSES ETLFKIMESM SSDQQWRQSH PNPCAPGSSW PGIECKTGPD HLSHVSRLDF GSAPNPSCKS
101: SASFPSSIFT LPFLQSVFFF NCFTHFPTTI MFPIKLIPNS SLQQLSLRSN PSLSGQIPPR ISSLKSLQIL TLSQNRLTGD IPPAIFSLKS LVHLDLSYNK
201: LTGKIPLQLG NLNNLVGLDL SYNSLTGTIP PTISQLGMLQ KLDLSSNSLF GRIPEGVEKL RSLSFMALSN NKLKGAFPKG ISNLQSLQYF IMDNNPMFVA
301: LPVELGFLPK LQELQLENSG YSGVIPESYT KLTNLSSLSL ANNRLTGEIP SGFESLPHVF HLNLSRNLLI GVVPFDSSFL RRLGKNLDLS GNRGLCLNPE
401: DEFSVVKTGV DVCGKNVSSG GGLSVHSSKK KSQASRYYRS CFFANALFPF ALFLGLHQRW VL

Arabidopsis Description

AtRLP29RLP29 [Source:UniProtKB/TrEMBL;Acc:A0A178VT48]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.