CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

extracellular 7
endoplasmic reticulum 5
vacuole 5
plasma membrane 6
golgi 5
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	extracellular, nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d033230_P001	Maize	extracellular, vacuole	77.82	78.32
TraesCS5D01G384300.1	Wheat	plasma membrane	67.99	71.27
TraesCS5B01G376600.1	Wheat	plasma membrane	67.36	70.31
TraesCS5A01G374600.2	Wheat	extracellular, vacuole	67.36	69.85
HORVU5Hr1G092930.2	Barley	plasma membrane	67.99	64.74
VIT_09s0070g00390.t01	Wine grape	extracellular	44.77	46.72
GSMUA_Achr7P01190_001	Banana	extracellular	42.68	45.33
KRH42561	Soybean	cytosol	41.21	44.67
KRH11174	Soybean	plasma membrane	42.89	43.25
KRH58668	Soybean	cytosol	25.94	40.66
KRH21079	Soybean	extracellular	41.84	39.37
EES01405	Sorghum	extracellular, plasma membrane	37.24	37.55
EES19861	Sorghum	plastid	36.4	36.71
KXG32097	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	17.78	17.78
KXG32099	Sorghum	plasma membrane	17.57	17.43
EES01095	Sorghum	extracellular, plasma membrane, vacuole	17.99	17.06

Protein Annotations

Gene3D:3.80.10.10	MapMan:35.1	UniProt:C5WR71	EnsemblPlants:EER93755	ProteinID:EER93755	ProteinID:EER93755.1
GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0016020	GO:GO:0016021
InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF00560
PFAM:PF13855	PRINTS:PR00019	PANTHER:PTHR45183	PANTHER:PTHR45183:SF1	SMART:SM00369	EnsemblPlantsGene:SORBI_3001G155800
SUPFAM:SSF52058	SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0001A82B72	RefSeq:XP_002466757.1	SEG:seg

Description

hypothetical protein

Coordinates

chr1:-:12608609..12610117

Molecular Weight (calculated)

49759.2 Da

IEP (calculated)

7.742

GRAVY (calculated)

0.166

Length

478 amino acids

Sequence
(BLAST)

001: MAAASTLFYS LSLLLLLHLH ATPAAGSVST VAGDAPAPQL PRAELAAIFR VMADLLGDPA WPRLHPRPCT DTPWPGLQCE VAPDDARVLR ATRLHLGPDV
101: ATPPCRPGAR LDAASLRGLP HLRTLSIFGC FGAAADDDVE LPPGLFAGAA SSSLEQIVLK SNPGLRGSIP ATLSGLRSLR VLSLSQNGFR GRIPRELGGL
201: AALQQLDLSY NNLTGEIPEE IGAMASLTIL DLSWNSIDGG VPATLGKLQR LQKADLSYNR LAGRVPPEVG SLRELVFLDL SHNSLAGPLP SSLAGLSRLQ
301: YLLLQDNPLG TAVPAVVGSL RRLQVLGLSG CDLTGPIPRG AFAALASLTA LSLDRNRLDG PIPASLAALP HLGQLNLSQN RLAGEIALPG DFVARLGRRL
401: DVRGNDELCV GRGLQGSGYL GAPPCVDGHN GDGSPERSGA AAAVGGGRRR GYGYAAVAMF DGSACHLFVS CLVLVFQL

Best Arabidopsis Sequence Match ( AT2G42800.1 )
(BLAST)

001: MTMKRALPSP SSLLFFFLLI TPLFLCQENR VSASMPPSES ETLFKIMESM SSDQQWRQSH PNPCAPGSSW PGIECKTGPD HLSHVSRLDF GSAPNPSCKS
101: SASFPSSIFT LPFLQSVFFF NCFTHFPTTI MFPIKLIPNS SLQQLSLRSN PSLSGQIPPR ISSLKSLQIL TLSQNRLTGD IPPAIFSLKS LVHLDLSYNK
201: LTGKIPLQLG NLNNLVGLDL SYNSLTGTIP PTISQLGMLQ KLDLSSNSLF GRIPEGVEKL RSLSFMALSN NKLKGAFPKG ISNLQSLQYF IMDNNPMFVA
301: LPVELGFLPK LQELQLENSG YSGVIPESYT KLTNLSSLSL ANNRLTGEIP SGFESLPHVF HLNLSRNLLI GVVPFDSSFL RRLGKNLDLS GNRGLCLNPE
401: DEFSVVKTGV DVCGKNVSSG GGLSVHSSKK KSQASRYYRS CFFANALFPF ALFLGLHQRW VL

Arabidopsis Description

AtRLP29RLP29 [Source:UniProtKB/TrEMBL;Acc:A0A178VT48]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.