Subcellular Localization
min:
: max
Winner_takes_all: plasma membrane
Predictor Summary:
Predictor Summary:
- extracellular 4
- endoplasmic reticulum 4
- vacuole 4
- plasma membrane 6
- golgi 4
- cytosol 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| TraesCS5A01G374600.2 | Wheat | extracellular, vacuole | 94.32 | 93.71 |
| TraesCS5D01G384300.1 | Wheat | plasma membrane | 92.36 | 92.76 |
| HORVU5Hr1G092930.2 | Barley | plasma membrane | 86.24 | 78.69 |
| EER93755 | Sorghum | extracellular, plasma membrane | 70.31 | 67.36 |
| Zm00001d033230_P001 | Maize | extracellular, vacuole | 69.65 | 67.16 |
| GSMUA_Achr7P01190_001 | Banana | extracellular | 44.76 | 45.56 |
| VIT_09s0070g00390.t01 | Wine grape | extracellular | 44.54 | 44.54 |
| KRH11174 | Soybean | plasma membrane | 43.23 | 41.77 |
| KRH42561 | Soybean | cytosol | 40.17 | 41.72 |
| TraesCS1B01G365000.1 | Wheat | extracellular, vacuole | 39.74 | 41.65 |
| KRH21079 | Soybean | extracellular | 44.1 | 39.76 |
| KRH58668 | Soybean | cytosol | 25.55 | 38.36 |
| TraesCS3B01G316600.1 | Wheat | extracellular, plasma membrane | 37.34 | 37.34 |
| TraesCS2B01G376300.1 | Wheat | extracellular | 19.0 | 17.79 |
| TraesCS3B01G086700.2 | Wheat | extracellular, plasma membrane, vacuole | 16.81 | 15.71 |
Protein Annotations
| EnsemblPlants:TraesCS5B01G376600.1 | EnsemblPlantsGene:TraesCS5B01G376600 | Gene3D:3.80.10.10 | GO:GO:0003674 | GO:GO:0005488 | GO:GO:0005515 |
| InterPro:IPR001611 | InterPro:IPR032675 | InterPro:LRR_dom_sf | InterPro:Leu-rich_rpt | InterPro:Leu-rich_rpt_typical-subtyp | PANTHER:PTHR45183 |
| PANTHER:PTHR45183:SF1 | PFAM:PF13855 | PRINTS:PR00019 | SEG:seg | SignalP:SignalP-noTM | SMART:SM00369 |
| SUPFAM:SSF52058 | TMHMM:TMhelix | MapMan:35.1 | : | : | : |
Description
No Description!
Coordinates
chr5B:-:554522721..554524202
Molecular Weight (calculated)
47409.9 Da
IEP (calculated)
6.853
GRAVY (calculated)
0.303
Length
458 amino acids
Sequence
(BLAST)
(BLAST)
001: MASSSSLLSA GVSILLIQAV AVSVGVATAG DAPAQLPRSE LAAIFRVMAD LLGDPTWPQL HPRPCTDTPW PGLQCELAPD DSTRLRATRL HFGPDVSTPP
101: CRPGARLAAP AILGLPHLRT LSLFGCFVDA GPVELPTALF TNASSLEQLV LKSNPGLTGR IPATLTNLKS LQVLSLSQNG FHGEIPRELG GLTALQQLDL
201: SYNNITGEIP DEIGGMASLS ILDLSWNGIG GGVPAALGGL KMLQKADLSY NWLAGVVPPE VGSLKELVFL DLSHNGLAGP LPASLAGLAK LQYLLLQDNP
301: IGTAVPAVVG SLRRLQVLGL SGCNLTGPIP RGAFAALGSL MALSLDRNRL DGPIPASLGA LPHLGQLNLS QNRLAGEIAL PVEFVARLGR RLDVRGNEEL
401: CVGQGRYGGL QASYLRAPPC VGRGSTNGTA ALDEGAAGVY GPVVGLVCHL LVLLALKL
101: CRPGARLAAP AILGLPHLRT LSLFGCFVDA GPVELPTALF TNASSLEQLV LKSNPGLTGR IPATLTNLKS LQVLSLSQNG FHGEIPRELG GLTALQQLDL
201: SYNNITGEIP DEIGGMASLS ILDLSWNGIG GGVPAALGGL KMLQKADLSY NWLAGVVPPE VGSLKELVFL DLSHNGLAGP LPASLAGLAK LQYLLLQDNP
301: IGTAVPAVVG SLRRLQVLGL SGCNLTGPIP RGAFAALGSL MALSLDRNRL DGPIPASLGA LPHLGQLNLS QNRLAGEIAL PVEFVARLGR RLDVRGNEEL
401: CVGQGRYGGL QASYLRAPPC VGRGSTNGTA ALDEGAAGVY GPVVGLVCHL LVLLALKL
001: MASFTNLSLL LLFLFTATLI TSQQSDDDEN ASPQLALDPS EQEAVYRVLD SVNSAISWRT IFPDDICASP PDGVVCDNLY ASQNGVATSV HVTEFHLGYL
101: SDYTQNPPCS SNATLDPLLF TAFKHLRKLF FYKCFTDARA SLPLTVPEDF GSVLEELVFI ENPSLVGEIG AMIGNFTKLR RLVLTGNGFH GSIPGQIGDL
201: VSLEEITLSR NSLTGGFPAN ATSRLKNLKV LDFSHNFING NAPDSIGDLT ELLKLDLSFN EFTGEVPSGV GNLKKLVFLD LSYNRFGNFG VPLFLAEMSS
301: LREVHLSGNK LGGRIPAIWK NLEGISGIGF SRMGLEGNIP ASMGSSLKNL CFLALDNNNL DGQIPEEFGF LDSAREINLE NNNLTGKAPF SDSFRDRIGK
401: KLKLSGNVNL QVKNSDPHLA GRALYSSARK VLPLIYFPAT LLALYISITQ
101: SDYTQNPPCS SNATLDPLLF TAFKHLRKLF FYKCFTDARA SLPLTVPEDF GSVLEELVFI ENPSLVGEIG AMIGNFTKLR RLVLTGNGFH GSIPGQIGDL
201: VSLEEITLSR NSLTGGFPAN ATSRLKNLKV LDFSHNFING NAPDSIGDLT ELLKLDLSFN EFTGEVPSGV GNLKKLVFLD LSYNRFGNFG VPLFLAEMSS
301: LREVHLSGNK LGGRIPAIWK NLEGISGIGF SRMGLEGNIP ASMGSSLKNL CFLALDNNNL DGQIPEEFGF LDSAREINLE NNNLTGKAPF SDSFRDRIGK
401: KLKLSGNVNL QVKNSDPHLA GRALYSSARK VLPLIYFPAT LLALYISITQ
Arabidopsis Description
RIC7ROP-interactive CRIB motif-containing protein 7 [Source:UniProtKB/TrEMBL;Acc:F4JLB7]
SUBAcon: [extracellular,vacuole]
SUBAcon: [extracellular,vacuole]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.