Factsheet for VIT_09s0070g00390.t01

Subcellular Localization

min:

: max

Winner_takes_all: extracellular

Predictor Summary:

extracellular 8
endoplasmic reticulum 5
vacuole 5
plasma membrane 6
golgi 5
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular, nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	extracellular
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH42561	Soybean	cytosol	46.29	48.07
GSMUA_Achr7P01190_001	Banana	extracellular	44.98	45.78
KRH58668	Soybean	cytosol	30.13	45.25
KRH11174	Soybean	plasma membrane	46.51	44.94
Zm00001d033230_P001	Maize	extracellular, vacuole	46.51	44.84
EER93755	Sorghum	extracellular, plasma membrane	46.72	44.77
TraesCS5D01G384300.1	Wheat	plasma membrane	44.54	44.74
TraesCS5A01G374600.2	Wheat	extracellular, vacuole	44.98	44.69
TraesCS5B01G376600.1	Wheat	plasma membrane	44.54	44.54
KRH21079	Soybean	extracellular	46.29	41.73
HORVU5Hr1G092930.2	Barley	plasma membrane	45.63	41.63
VIT_12s0142g00620.t01	Wine grape	cytosol	17.47	18.74
VIT_01s0011g02800.t01	Wine grape	extracellular	17.03	16.15
VIT_09s0002g07030.t01	Wine grape	plasma membrane	16.59	15.8
VIT_07s0005g03750.t01	Wine grape	plasma membrane	15.72	15.48

Protein Annotations

EntrezGene:100249916	wikigene:100249916	MapMan:11.10.2.3.3	Gene3D:3.80.10.10	ProteinID:CCB61449	ProteinID:CCB61449.1
UniProt:F6I3D1	EMBL:FN596740	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	InterPro:IPR001611
InterPro:IPR032675	EntrezGene:LOC100249916	wikigene:LOC100249916	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp
PFAM:PF13855	PRINTS:PR00019	PANTHER:PTHR44325	PANTHER:PTHR44325:SF2	SMART:SM00369	SUPFAM:SSF52058
SignalP:SignalP-noTM	UniParc:UPI0002109F0F	ArrayExpress:VIT_09s0070g00390	EnsemblPlantsGene:VIT_09s0070g00390	EnsemblPlants:VIT_09s0070g00390.t01	RefSeq:XP_002274148
RefSeq:XP_002274148.1	RefSeq:XP_002274148.2	SEG:seg	:	:	:

Description

No Description!

Coordinates

chr9:+:13603531..13604907

Molecular Weight (calculated)

50013.9 Da

IEP (calculated)

7.383

GRAVY (calculated)

0.051

Length

458 amino acids

Sequence
(BLAST)

001: MASLPSLVGF LLLGALLVSS TAQNMTPGME AGEFLGLSEV MGALLDNPNW TQMHPHPCTH TPWPGIRCDV IHHGHDSLPI LHVTKLHIGP DVANPPVCKT
101: TAYLSASLLK LPHHNSLSIV GCFRMSRVFL PAPIFGSFSS LEQLVVKSNP GLYGEIPLTL ADTTTLRVLS LSQNSLHGQV PKGLGRLRKL EQLDLSYNNL
201: TGKIPQEIGG LKSLTILDMS YNGLQGRLPY SLGQLQTLQK IDLSHNRLVG RIPSVIGRLK QLVFLDLSHN NLTGPIPDTL SGLKRLEYLL VENNPLNTKL
301: PWFMGTLVNL TVLSLSTCGL VGTIPPSFCW LDQLIVLYLD RNNLHGTVPP KLGALPNLCQ LNLSQNQLSG ELYFSSEFVQ RLGKKLDASG NDGLCTGHQF
401: NEQVSQYLGI PPCADQTAKS SNTSDHENSN PYWTDASNAI IKEPMLLYLI CCNLIGFL

Best Arabidopsis Sequence Match ( AT2G42800.1 )
(BLAST)

001: MTMKRALPSP SSLLFFFLLI TPLFLCQENR VSASMPPSES ETLFKIMESM SSDQQWRQSH PNPCAPGSSW PGIECKTGPD HLSHVSRLDF GSAPNPSCKS
101: SASFPSSIFT LPFLQSVFFF NCFTHFPTTI MFPIKLIPNS SLQQLSLRSN PSLSGQIPPR ISSLKSLQIL TLSQNRLTGD IPPAIFSLKS LVHLDLSYNK
201: LTGKIPLQLG NLNNLVGLDL SYNSLTGTIP PTISQLGMLQ KLDLSSNSLF GRIPEGVEKL RSLSFMALSN NKLKGAFPKG ISNLQSLQYF IMDNNPMFVA
301: LPVELGFLPK LQELQLENSG YSGVIPESYT KLTNLSSLSL ANNRLTGEIP SGFESLPHVF HLNLSRNLLI GVVPFDSSFL RRLGKNLDLS GNRGLCLNPE
401: DEFSVVKTGV DVCGKNVSSG GGLSVHSSKK KSQASRYYRS CFFANALFPF ALFLGLHQRW VL

Arabidopsis Description

AtRLP29RLP29 [Source:UniProtKB/TrEMBL;Acc:A0A178VT48]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.