CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular, vacuole

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 6
plasma membrane 6
golgi 5
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	plasma membrane
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Zm00001d044182_P001	Maize	vacuole	80.56	80.24
Os01t0623000-00	Rice	plasma membrane	73.02	74.49
TraesCS2A01G357100.1	Wheat	plasma membrane	67.06	69.69
TraesCS2B01G376300.1	Wheat	extracellular	67.06	69.12
HORVU2Hr1G086860.1	Barley	plasma membrane	67.46	68.97
TraesCS2D01G355900.1	Wheat	plasma membrane	66.87	68.78
GSMUA_Achr7P24750_001	Banana	cytosol	49.8	52.29
VIT_09s0002g07030.t01	Wine grape	plasma membrane	43.06	45.11
PGSC0003DMT400073695	Potato	cytosol	40.87	44.88
Solyc12g042760.1.1	Tomato	plasma membrane	41.07	43.22
CDY54307	Canola	extracellular	42.06	43.09
Bra003549.1-P	Field mustard	extracellular	42.26	42.86
CDY57686	Canola	extracellular	42.06	42.66
KRH23585	Soybean	extracellular, plasma membrane, vacuole	41.47	42.65
Bra003550.1-P	Field mustard	extracellular	10.32	41.94
AT1G80080.1	Thale cress	plasma membrane	41.27	41.94
KXG32097	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	28.57	30.13
KXG32099	Sorghum	plasma membrane	28.57	29.88
EES01405	Sorghum	extracellular, plasma membrane	17.86	18.99
EER93755	Sorghum	extracellular, plasma membrane	17.06	17.99
EES19861	Sorghum	plastid	16.07	17.09

Protein Annotations

MapMan:11.10.2.3.3	Gene3D:3.80.10.10	UniProt:C5XR66	EnsemblPlants:EES01095	ProteinID:EES01095	ProteinID:EES01095.2
GO:GO:0003674	GO:GO:0005102	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0006950
GO:GO:0007275	GO:GO:0008150	GO:GO:0008356	GO:GO:0009605	GO:GO:0009607	GO:GO:0009653
GO:GO:0009719	GO:GO:0009737	GO:GO:0009791	GO:GO:0009987	GO:GO:0010090	GO:GO:0010375
GO:GO:0010376	GO:GO:0016020	GO:GO:0016043	GO:GO:0030154	GO:GO:0033612	GO:GO:0042277
GO:GO:0050832	GO:GO:0071215	GO:GO:1905034	InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf
InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF00560	PFAM:PF13855	PRINTS:PR00019	PANTHER:PTHR44325
SMART:SM00369	EnsemblPlantsGene:SORBI_3003G225500	SUPFAM:SSF52058	SignalP:SignalP-noTM	UniParc:UPI00081AD11C	SEG:seg

Description

hypothetical protein

Coordinates

chr3:-:56140522..56142036

Molecular Weight (calculated)

53893.3 Da

IEP (calculated)

7.949

GRAVY (calculated)

0.216

Length

504 amino acids

Sequence
(BLAST)

001: MASPVLPAWS SIIIVLVALA AVPPPCCRAE FTVVVPDTSS AAALVHAPQT GFSDRARTDP AEQRAVQEVM AATGNGWAWG IPDVCRGRWH GIECVPDRHD
101: VYHVVSLAFG ALSDDTAFPA CDAATATLSP AVLALPHLRS LFFYRCFTGN PQPIAALLGR LGPASFRSLV LRQNGHVGPI PAELGNLRAL RVLDLHGNQL
201: TAAVPATLQS LTHLRMLDLS YNRLDGPVPR FEFQRLSILD LSHNALQGGV PWSLGQCRAL LKIDLSQNRL TGTIPDALGE LSELMLLDLS HNALSGPIPA
301: ALSRLASLQS LILSDNRMQF STVPDGFFAG LKALTTLVLS GMGLAGTIPE SIGELGELRV LRLDNNQFTG VIPASFRRLE RASELRVDGN RLVGPIPFGK
401: EMMWRLGKKL RVGGNEGLCY DTKQEGLEGV VALAGVADCD SVRSRTTQHL VWSNATVVSR RGGVVATVTS SAAGPVSRNA GGTRVETAWL LVFVCLHLAW
501: FVAL

Best Arabidopsis Sequence Match ( AT1G80080.1 )
(BLAST)

001: MARYEFFRQI FIVLSIVSPL VRSFTVITSD STAPSALIDG PQTGFTMTND GARTEPDEQD AVYDIMRATG NDWAAAIPDV CRGRWHGIEC MPDQDNVYHV
101: VSLSFGALSD DTAFPTCDPQ RSYVSESLTR LKHLKALFFY RCLGRAPQRI PAFLGRLGSS LQTLVLRENG FLGPIPDELG NLTNLKVLDL HKNHLNGSIP
201: LSFNRFSGLR SLDLSGNRLT GSIPGFVLPA LSVLDLNQNL LTGPVPPTLT SCGSLIKIDL SRNRVTGPIP ESINRLNQLV LLDLSYNRLS GPFPSSLQGL
301: NSLQALMLKG NTKFSTTIPE NAFKGLKNLM ILVLSNTNIQ GSIPKSLTRL NSLRVLHLEG NNLTGEIPLE FRDVKHLSEL RLNDNSLTGP VPFERDTVWR
401: MRRKLRLYNN AGLCVNRDSD LDDAFGSKSG STVRLCDAET SRPAPSGTVQ HLSREEDGAL PDGATDVSST SKSLGFSYLS AFFLVFPNFI FMLISS

Arabidopsis Description

TMMTMM [Source:UniProtKB/TrEMBL;Acc:A0A178WJY8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.