Factsheet for TraesCS2D01G355900.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

plastid 1
extracellular 4
endoplasmic reticulum 4
vacuole 4
plasma membrane 6
golgi 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	cytosol, plastid, secretory
ChloroP:	plastid
iPSORT:	secretory
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2B01G376300.1	Wheat	extracellular	92.65	92.84
TraesCS2A01G357100.1	Wheat	plasma membrane	90.82	91.75
HORVU2Hr1G086860.1	Barley	plasma membrane	84.69	84.18
Os01t0623000-00	Rice	plasma membrane	75.31	74.7
Zm00001d044182_P001	Maize	vacuole	69.59	67.39
EES01095	Sorghum	extracellular, plasma membrane, vacuole	68.78	66.87
GSMUA_Achr7P24750_001	Banana	cytosol	52.04	53.12
PGSC0003DMT400073695	Potato	cytosol	43.88	46.84
Solyc12g042760.1.1	Tomato	plasma membrane	44.08	45.09
VIT_09s0002g07030.t01	Wine grape	plasma membrane	43.88	44.7
Bra003550.1-P	Field mustard	extracellular	10.82	42.74
Bra003549.1-P	Field mustard	extracellular	42.86	42.25
AT1G80080.1	Thale cress	plasma membrane	42.65	42.14
CDY54307	Canola	extracellular	42.24	42.07
KRH23585	Soybean	extracellular, plasma membrane, vacuole	42.04	42.04
CDY57686	Canola	extracellular	42.45	41.85
TraesCS3D01G072400.2	Wheat	extracellular, plasma membrane	30.0	30.12
TraesCS3D01G072300.2	Wheat	endoplasmic reticulum, plasma membrane, vacuole	28.78	29.25
TraesCS1D01G353700.1	Wheat	extracellular, vacuole	17.76	19.91
TraesCS5D01G384300.1	Wheat	plasma membrane	17.55	18.86
TraesCS3D01G282900.1	Wheat	extracellular, plasma membrane	16.94	18.49

Protein Annotations

MapMan:11.10.2.3.3	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005102	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0006950	GO:GO:0007275	GO:GO:0008150	GO:GO:0008356	GO:GO:0009605
GO:GO:0009607	GO:GO:0009653	GO:GO:0009719	GO:GO:0009737	GO:GO:0009791	GO:GO:0009987
GO:GO:0010090	GO:GO:0010375	GO:GO:0010376	GO:GO:0016020	GO:GO:0016043	GO:GO:0030154
GO:GO:0033612	GO:GO:0042277	GO:GO:0050832	GO:GO:0071215	GO:GO:1905034	InterPro:IPR001611
InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF13855	PRINTS:PR00019
PANTHER:PTHR44325	SMART:SM00369	SUPFAM:SSF52058	SignalP:SignalP-noTM	EnsemblPlantsGene:TraesCS2D01G355900	EnsemblPlants:TraesCS2D01G355900.1
SEG:seg	:	:	:	:	:

Description

No Description!

Coordinates

chr2D:-:458172776..458174248

Molecular Weight (calculated)

51507.6 Da

IEP (calculated)

8.503

GRAVY (calculated)

0.193

Length

490 amino acids

Sequence
(BLAST)

001: MASPLMSALT LVVAMVASFG RPCRGEFTVV VPGAGALVDA PQPGFSDRAR TDPAEQRAVL EVMAATGNGW ASGIADVCRG RWHGIECVPD RADVYHVVSL
101: SFGALSDDTA FPACDPARAA LSPAVLALPH LRSLFFYRCF TANPQPVPAF LGRLGPAFRS LVLRQNGHVG PIPPEIGSLS GLRVLDLHGN HLTSAIPATV
201: QWLDRLQLLD LSYNRLAGQV PNLRFQQLSI LDLSHNALQG RVPASLGQCR SLLKIDLSQN RLAGTIPDAL GDLPDLILLD LSHNALSGPI PAAVGRLSTL
301: RSLILGDNPM QLSTIPGDLF TGLKALTTLV LSGMGLQGPL PESIGGLSQL RVLRLDSNGF TGVIPASFRR LEKASELRVD GNRLVGPIPF GKQMMWRLGK
401: KLRVGGNEGL CYDAKQEGLE GAMALAGVAD CASVGSRTTT QHLSWKNSGG ATATATATAN VTSSAADSNS GRGGGHIFLV VLVCLQLALL

Best Arabidopsis Sequence Match ( AT1G80080.1 )
(BLAST)

001: MARYEFFRQI FIVLSIVSPL VRSFTVITSD STAPSALIDG PQTGFTMTND GARTEPDEQD AVYDIMRATG NDWAAAIPDV CRGRWHGIEC MPDQDNVYHV
101: VSLSFGALSD DTAFPTCDPQ RSYVSESLTR LKHLKALFFY RCLGRAPQRI PAFLGRLGSS LQTLVLRENG FLGPIPDELG NLTNLKVLDL HKNHLNGSIP
201: LSFNRFSGLR SLDLSGNRLT GSIPGFVLPA LSVLDLNQNL LTGPVPPTLT SCGSLIKIDL SRNRVTGPIP ESINRLNQLV LLDLSYNRLS GPFPSSLQGL
301: NSLQALMLKG NTKFSTTIPE NAFKGLKNLM ILVLSNTNIQ GSIPKSLTRL NSLRVLHLEG NNLTGEIPLE FRDVKHLSEL RLNDNSLTGP VPFERDTVWR
401: MRRKLRLYNN AGLCVNRDSD LDDAFGSKSG STVRLCDAET SRPAPSGTVQ HLSREEDGAL PDGATDVSST SKSLGFSYLS AFFLVFPNFI FMLISS

Arabidopsis Description

TMMTMM [Source:UniProtKB/TrEMBL;Acc:A0A178WJY8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.