Factsheet for Os01t0623000-00

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane

Predictor Summary:

extracellular 6
endoplasmic reticulum 5
vacuole 5
plasma membrane 8
golgi 5
nucleus 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	plasma membrane
Any Predictor:	nucleus, secretory
BaCelLo:	secretory
EpiLoc:	nucleus
iPSORT:	secretory
MultiLoc:	plasma membrane
Plant-mPloc:	extracellular, nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS2A01G357100.1	Wheat	plasma membrane	74.49	75.88
HORVU2Hr1G086860.1	Barley	plasma membrane	75.3	75.46
TraesCS2D01G355900.1	Wheat	plasma membrane	74.7	75.31
TraesCS2B01G376300.1	Wheat	extracellular	74.29	75.05
EES01095	Sorghum	extracellular, plasma membrane, vacuole	74.49	73.02
Zm00001d044182_P001	Maize	vacuole	73.68	71.94
GSMUA_Achr7P24750_001	Banana	cytosol	52.23	53.75
PGSC0003DMT400073695	Potato	cytosol	43.12	46.41
VIT_09s0002g07030.t01	Wine grape	plasma membrane	43.32	44.49
Solyc12g042760.1.1	Tomato	plasma membrane	42.71	44.05
Bra003549.1-P	Field mustard	extracellular	43.12	42.86
Bra003550.1-P	Field mustard	extracellular	10.73	42.74
CDY54307	Canola	extracellular	42.31	42.48
CDY57686	Canola	extracellular	42.51	42.25
KRH23585	Soybean	extracellular, plasma membrane, vacuole	41.9	42.24
AT1G80080.1	Thale cress	plasma membrane	41.3	41.13
Os01t0110800-01	Rice	plasma membrane	27.53	30.22
Os06t0627500-01	Rice	extracellular	25.51	28.44
Os01t0729400-01	Rice	plasma membrane, vacuole	18.22	19.82
Os05t0530701-01	Rice	plasma membrane	17.41	18.26

Protein Annotations

MapMan:11.10.2.3.3	Gene3D:3.80.10.10	UniProt:A0A0P0V5F4	ProteinID:BAS73229.1	GO:GO:0003674	GO:GO:0005102
GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0006950	GO:GO:0007275	GO:GO:0008150
GO:GO:0008356	GO:GO:0009605	GO:GO:0009607	GO:GO:0009653	GO:GO:0009719	GO:GO:0009737
GO:GO:0009791	GO:GO:0009987	GO:GO:0010090	GO:GO:0010375	GO:GO:0010376	GO:GO:0016020
GO:GO:0016043	GO:GO:0030154	GO:GO:0033612	GO:GO:0042277	GO:GO:0050832	GO:GO:0071215
GO:GO:1905034	InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp
EnsemblPlantsGene:Os01g0623000	EnsemblPlants:Os01t0623000-00	PFAM:PF00560	PFAM:PF13855	PRINTS:PR00019	PANTHER:PTHR44325
SMART:SM00369	SUPFAM:SSF52058	SignalP:SignalP-TM	TMHMM:TMhelix	UniParc:UPI00000A10D8	SEG:seg

Description

TOO MANY MOUTHSHypothetical conserved gene. (Os01t0623000-00)

Coordinates

chr1:-:24855937..24857421

Molecular Weight (calculated)

51783.7 Da

IEP (calculated)

7.793

GRAVY (calculated)

0.268

Length

494 amino acids

Sequence
(BLAST)

001: MVASALSATA AATVVVAVVA VLVAVCRGEF TVVVPDSSSS AALVNAPQTG LSDRARTDPA EQRAVQEVMA ATGNGWASGI ADVCRGRWHG IECVPDRGEV
101: YHVVSLSFGA LSDDTAFPAC DAARATLSPA VLALPHLRSL FFYRCFTANP QPVPAFLGRL GPAFRSLVLR ENGHVGAIPP ELGNLTALRV LDLHGNNLTS
201: AIPATVQSLA HLQLLDLSYN QLAGEVPPFK FQHLSILDLS HNALQGGVPA SLGQCRSLLK FDLSQNRFAG TIPDALGDLS DLILLDLSHN ALSGPIPAAL
301: GRLSSLRSLI LGDNRMQFTT VPGDIFAGLR ALTTLVLSGM GLEGSLPESI GELGHLRVLR LDNNEFTGVI PASFRRLERA SELRVDGNRL VGPIPFGKQM
401: MWRLGKKLRV GGNEGLCYDA KQQGLEGVVA LAGVADCDSV RSRTTQHLGG RLRNTGGLPA AAAAAPSVGV GAGVCVGSWH VFVGVLVSLH LARL

Best Arabidopsis Sequence Match ( AT1G80080.1 )
(BLAST)

001: MARYEFFRQI FIVLSIVSPL VRSFTVITSD STAPSALIDG PQTGFTMTND GARTEPDEQD AVYDIMRATG NDWAAAIPDV CRGRWHGIEC MPDQDNVYHV
101: VSLSFGALSD DTAFPTCDPQ RSYVSESLTR LKHLKALFFY RCLGRAPQRI PAFLGRLGSS LQTLVLRENG FLGPIPDELG NLTNLKVLDL HKNHLNGSIP
201: LSFNRFSGLR SLDLSGNRLT GSIPGFVLPA LSVLDLNQNL LTGPVPPTLT SCGSLIKIDL SRNRVTGPIP ESINRLNQLV LLDLSYNRLS GPFPSSLQGL
301: NSLQALMLKG NTKFSTTIPE NAFKGLKNLM ILVLSNTNIQ GSIPKSLTRL NSLRVLHLEG NNLTGEIPLE FRDVKHLSEL RLNDNSLTGP VPFERDTVWR
401: MRRKLRLYNN AGLCVNRDSD LDDAFGSKSG STVRLCDAET SRPAPSGTVQ HLSREEDGAL PDGATDVSST SKSLGFSYLS AFFLVFPNFI FMLISS

Arabidopsis Description

TMMTMM [Source:UniProtKB/TrEMBL;Acc:A0A178WJY8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.