Factsheet for PGSC0003DMT400073695

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 4
cytosol 2
extracellular 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc12g042760.1.1	Tomato	plasma membrane	87.8	84.13
VIT_09s0002g07030.t01	Wine grape	plasma membrane	60.57	57.8
KRH23585	Soybean	extracellular, plasma membrane, vacuole	57.73	54.08
Bra003549.1-P	Field mustard	extracellular	55.99	51.71
CDY54307	Canola	extracellular	55.34	51.63
CDY57686	Canola	extracellular	55.77	51.51
AT1G80080.1	Thale cress	plasma membrane	55.12	51.01
Bra003550.1-P	Field mustard	extracellular	13.73	50.81
GSMUA_Achr7P24750_001	Banana	cytosol	51.42	49.17
TraesCS2A01G357100.1	Wheat	plasma membrane	47.49	44.95
TraesCS2D01G355900.1	Wheat	plasma membrane	46.84	43.88
TraesCS2B01G376300.1	Wheat	extracellular	45.97	43.15
Os01t0623000-00	Rice	plasma membrane	46.41	43.12
HORVU2Hr1G086860.1	Barley	plasma membrane	45.75	42.6
Zm00001d044182_P001	Maize	vacuole	45.97	41.7
EES01095	Sorghum	extracellular, plasma membrane, vacuole	44.88	40.87
PGSC0003DMT400054822	Potato	plasma membrane	32.46	32.75
PGSC0003DMT400002145	Potato	extracellular	31.81	31.26
PGSC0003DMT400026717	Potato	cytosol	28.1	30.5
PGSC0003DMT400010384	Potato	cytosol	29.63	29.89

Protein Annotations

MapMan:11.10.2.3.3	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005102	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0006950	GO:GO:0007275	GO:GO:0008150	GO:GO:0008356	GO:GO:0009605
GO:GO:0009607	GO:GO:0009653	GO:GO:0009719	GO:GO:0009737	GO:GO:0009791	GO:GO:0009987
GO:GO:0010090	GO:GO:0010375	GO:GO:0010376	GO:GO:0016020	GO:GO:0016043	GO:GO:0030154
GO:GO:0033612	GO:GO:0042277	GO:GO:0050832	GO:GO:0071215	GO:GO:1905034	InterPro:IPR001611
InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	UniProt:M1CSH4	PFAM:PF00560
PFAM:PF13855	EnsemblPlantsGene:PGSC0003DMG400028627	PGSC:PGSC0003DMG400028627	EnsemblPlants:PGSC0003DMT400073695	PRINTS:PR00019	PFscan:PS51450
PANTHER:PTHR44325	SMART:SM00369	SUPFAM:SSF52058	UniParc:UPI000294DE48	SEG:seg	:

Description

Serine-threonine protein kinase, plant-type [Source:PGSC_GENE;Acc:PGSC0003DMG400028627]

Coordinates

chr12:-:49744644..49746244

Molecular Weight (calculated)

50494.8 Da

IEP (calculated)

7.341

GRAVY (calculated)

-0.118

Length

459 amino acids

Sequence
(BLAST)

001: MSDSGAPSAL VDAPQTGFSM NNNRARTDPR EQEAVYDIMR ATGNDWATDI PDVCRGRWHG IECMPDNDNV YHVVSLSFGA LSDDTAFPTC YSSHSFISPS
101: VRKLPHLRTL FFYRCFSNNP QPIPGFLAQL GPTLQTLVLR ENGFTGTIPN ELGNLTHLRV LDLHKNNLNG SIPISLGRII GLKSLDLSDN KLTGSIPSLT
201: FPQLNILDLN QNHLTGSIPS TLMSCHSLIK LDLSRNHLSG SIPDSIHNLN NLILLDLSYN SLTSPFQTLL KKLNSLQTLV LNGNPMDSAT LSDNVFDGFN
301: NLMILGLSNM NLQGPIPNSL GLLPMLRVLH LDGNKLNGSI PSSFGNLNNI SELRLNNNML SGPIPFKRDM VWRMRRKMKL SNNEGLCYNK ENGLGDDLET
401: LLDSGIGHCG DSKTEPIKTV QHISTLNRAS FVRSNSYKLL SSLGCLLWSA LVFVVVCLL

Best Arabidopsis Sequence Match ( AT1G80080.1 )
(BLAST)

001: MARYEFFRQI FIVLSIVSPL VRSFTVITSD STAPSALIDG PQTGFTMTND GARTEPDEQD AVYDIMRATG NDWAAAIPDV CRGRWHGIEC MPDQDNVYHV
101: VSLSFGALSD DTAFPTCDPQ RSYVSESLTR LKHLKALFFY RCLGRAPQRI PAFLGRLGSS LQTLVLRENG FLGPIPDELG NLTNLKVLDL HKNHLNGSIP
201: LSFNRFSGLR SLDLSGNRLT GSIPGFVLPA LSVLDLNQNL LTGPVPPTLT SCGSLIKIDL SRNRVTGPIP ESINRLNQLV LLDLSYNRLS GPFPSSLQGL
301: NSLQALMLKG NTKFSTTIPE NAFKGLKNLM ILVLSNTNIQ GSIPKSLTRL NSLRVLHLEG NNLTGEIPLE FRDVKHLSEL RLNDNSLTGP VPFERDTVWR
401: MRRKLRLYNN AGLCVNRDSD LDDAFGSKSG STVRLCDAET SRPAPSGTVQ HLSREEDGAL PDGATDVSST SKSLGFSYLS AFFLVFPNFI FMLISS

Arabidopsis Description

TMMTMM [Source:UniProtKB/TrEMBL;Acc:A0A178WJY8]
SUBAcon: [plasma membrane]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.