Factsheet for PGSC0003DMT400026717

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 3
extracellular 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc09g072630.2.1	Tomato	extracellular	82.27	80.37
VIT_07s0005g03750.t01	Wine grape	plasma membrane	57.68	52.47
Bra011040.1-P	Field mustard	extracellular, plasma membrane	50.12	48.07
CDY35199	Canola	extracellular, plasma membrane	50.12	48.07
CDY38378	Canola	extracellular	49.41	47.07
KRH19593	Soybean	extracellular, plasma membrane	46.1	45.56
AT4G28560.1	Thale cress	extracellular, vacuole	47.99	45.11
KRH32220	Soybean	extracellular, plasma membrane, vacuole	47.28	44.84
GSMUA_AchrUn_...	Banana	extracellular, plasma membrane	45.39	41.56
Os06t0627500-01	Rice	extracellular	34.04	32.51
PGSC0003DMT400010384	Potato	cytosol	31.68	29.45
PGSC0003DMT400002145	Potato	extracellular	31.21	28.27
PGSC0003DMT400073695	Potato	cytosol	30.5	28.1
PGSC0003DMT400054822	Potato	plasma membrane	28.61	26.59

Protein Annotations

Gene3D:3.80.10.10	MapMan:35.1	GO:GO:0000003	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0008150	GO:GO:0009653	GO:GO:0009856
GO:GO:0009860	GO:GO:0009987	GO:GO:0016020	GO:GO:0016021	GO:GO:0016043	GO:GO:0016049
GO:GO:0016324	GO:GO:0030154	GO:GO:0040007	InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf
InterPro:Leu-rich_rpt	UniProt:M1ANM7	PFAM:PF13855	EnsemblPlantsGene:PGSC0003DMG400010325	PGSC:PGSC0003DMG400010325	EnsemblPlants:PGSC0003DMT400026717
PANTHER:PTHR44325	PANTHER:PTHR44325:SF3	SUPFAM:SSF52058	TMHMM:TMhelix	UniParc:UPI0002954125	:

Description

Serine-threonine protein kinase, plant-type [Source:PGSC_GENE;Acc:PGSC0003DMG400010325]

Coordinates

chr9:-:50225624..50226895

Molecular Weight (calculated)

46100.8 Da

IEP (calculated)

4.678

GRAVY (calculated)

0.196

Length

423 amino acids

Sequence
(BLAST)

001: MVEQEAVYNV LESINSDVSW RSLFPDDLCS SSPHGVICDY FVSTTNSFTP HVTEISLGYV SDYAPNPPCT PNSTLNASLF TPFSYLRKIF VYKCFTENEV
101: SLIDFGSLPS SLEEVVFLEN PGLVGSLSDK VGNLMSLRRL VLSGSGVYGE IPNGVGGLVN LEQLTLSRNK ISGEIPVGLM TLKKLKILDL SQNELESSVL
201: ESIGNFTQLL KLDLSYNKLT GKIPQSLKGL KSLEFLDFSY NNFSNSGVPL FLAEMSSLKE VYLSGNYLGG EIPEIWENLE GIVGLGLSKT GLVGNIPVSM
301: GVYLKNICYL GLDNNKLEGA LPEEFGALEY VNELHLENNN LSGRLPFSPK FVSKVGEKLK LGGNPQLCVD EGLRISNVSV SLRLLKMCNN AISAKFVPFS
401: GASLVLVPVS HVVFFLGILF LLC

Best Arabidopsis Sequence Match ( AT4G28560.1 )
(BLAST)

001: MASFTNLSLL LLFLFTATLI TSQQSDDDEN ASPQLALDPS EQEAVYRVLD SVNSAISWRT IFPDDICASP PDGVVCDNLY ASQNGVATSV HVTEFHLGYL
101: SDYTQNPPCS SNATLDPLLF TAFKHLRKLF FYKCFTDARA SLPLTVPEDF GSVLEELVFI ENPSLVGEIG AMIGNFTKLR RLVLTGNGFH GSIPGQIGDL
201: VSLEEITLSR NSLTGGFPAN ATSRLKNLKV LDFSHNFING NAPDSIGDLT ELLKLDLSFN EFTGEVPSGV GNLKKLVFLD LSYNRFGNFG VPLFLAEMSS
301: LREVHLSGNK LGGRIPAIWK NLEGISGIGF SRMGLEGNIP ASMGSSLKNL CFLALDNNNL DGQIPEEFGF LDSAREINLE NNNLTGKAPF SDSFRDRIGK
401: KLKLSGNVNL QVKNSDPHLA GRALYSSARK VLPLIYFPAT LLALYISITQ

Arabidopsis Description

RIC7ROP-interactive CRIB motif-containing protein 7 [Source:UniProtKB/TrEMBL;Acc:F4JLB7]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.