Factsheet for AT4G28560.1

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

endoplasmic reticulum 5
golgi 5
extracellular 6
vacuole 5
plasma membrane 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	plastid, secretory
BaCelLo:	endoplasmic reticulum, extracellular, golgi
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra011040.1-P	Field mustard	extracellular, plasma membrane	73.56	75.06
CDY35199	Canola	extracellular, plasma membrane	71.78	73.24
CDY38378	Canola	extracellular	70.89	71.85
Solyc09g072630.2.1	Tomato	extracellular	47.33	49.19
VIT_07s0005g03750.t01	Wine grape	plasma membrane	50.22	48.6
PGSC0003DMT400026717	Potato	cytosol	45.11	47.99
KRH32220	Soybean	extracellular, plasma membrane, vacuole	44.89	45.29
KRH19593	Soybean	extracellular, plasma membrane	39.78	41.82
GSMUA_AchrUn_...	Banana	extracellular, plasma membrane	42.44	41.34
AT1G13230.1	Thale cress	extracellular	31.78	33.73
AT1G68780.1	Thale cress	extracellular, golgi	29.78	31.02
Os06t0627500-01	Rice	extracellular	29.78	30.25
AT3G25670.1	Thale cress	extracellular	30.44	28.84
AT2G42800.1	Thale cress	vacuole	28.0	27.27
AT1G80080.1	Thale cress	plasma membrane	27.33	24.8

Protein Annotations

Gene3D:3.80.10.10	MapMan:35.1	EntrezGene:828974	UniProt:A0A178UZ08	ProteinID:AEE85506.1	ArrayExpress:AT4G28560
EnsemblPlantsGene:AT4G28560	RefSeq:AT4G28560	TAIR:AT4G28560	RefSeq:AT4G28560-TAIR-G	EnsemblPlants:AT4G28560.1	TAIR:AT4G28560.1
Unigene:At.23299	UniProt:F4JLB7	GO:GO:0000003	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
GO:GO:0005575	GO:GO:0005623	GO:GO:0005886	GO:GO:0008150	GO:GO:0009653	GO:GO:0009856
GO:GO:0009860	GO:GO:0009987	GO:GO:0016020	GO:GO:0016043	GO:GO:0016049	GO:GO:0016324
GO:GO:0030154	GO:GO:0031225	GO:GO:0040007	InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf
InterPro:Leu-rich_rpt	RefSeq:NP_194585.1	ProteinID:OAO98875.1	PFAM:PF13516	PFAM:PF13855	PO:PO:0000037
PO:PO:0001078	PO:PO:0001185	PO:PO:0004507	PO:PO:0007611	PO:PO:0007616	PO:PO:0009009
PO:PO:0009010	PO:PO:0009031	PO:PO:0009046	PO:PO:0009052	PO:PO:0025022	PANTHER:PTHR44325
PANTHER:PTHR44325:SF3	Symbol:RIC7	SUPFAM:SSF52058	SignalP:SignalP-noTM	UniParc:UPI0000162B40	SEG:seg

Description

RIC7ROP-interactive CRIB motif-containing protein 7 [Source:UniProtKB/TrEMBL;Acc:F4JLB7]

Coordinates

chr4:-:14116015..14117367

Molecular Weight (calculated)

49047.5 Da

IEP (calculated)

4.914

GRAVY (calculated)

0.018

Length

450 amino acids

Sequence
(BLAST)

001: MASFTNLSLL LLFLFTATLI TSQQSDDDEN ASPQLALDPS EQEAVYRVLD SVNSAISWRT IFPDDICASP PDGVVCDNLY ASQNGVATSV HVTEFHLGYL
101: SDYTQNPPCS SNATLDPLLF TAFKHLRKLF FYKCFTDARA SLPLTVPEDF GSVLEELVFI ENPSLVGEIG AMIGNFTKLR RLVLTGNGFH GSIPGQIGDL
201: VSLEEITLSR NSLTGGFPAN ATSRLKNLKV LDFSHNFING NAPDSIGDLT ELLKLDLSFN EFTGEVPSGV GNLKKLVFLD LSYNRFGNFG VPLFLAEMSS
301: LREVHLSGNK LGGRIPAIWK NLEGISGIGF SRMGLEGNIP ASMGSSLKNL CFLALDNNNL DGQIPEEFGF LDSAREINLE NNNLTGKAPF SDSFRDRIGK
401: KLKLSGNVNL QVKNSDPHLA GRALYSSARK VLPLIYFPAT LLALYISITQ

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.