CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 5
golgi 4
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	plastid, secretory
BaCelLo:	secretory
iPSORT:	plastid
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra011040.1-P	Field mustard	extracellular, plasma membrane	91.84	91.84
CDY38378	Canola	extracellular	85.71	85.14
AT4G28560.1	Thale cress	extracellular, vacuole	73.24	71.78
PGSC0003DMT400026717	Potato	cytosol	48.07	50.12
Solyc09g072630.2.1	Tomato	extracellular	48.75	49.65
VIT_07s0005g03750.t01	Wine grape	plasma membrane	49.66	47.1
KRH32220	Soybean	extracellular, plasma membrane, vacuole	46.26	45.74
KRH19593	Soybean	extracellular, plasma membrane	42.63	43.93
GSMUA_AchrUn_...	Banana	extracellular, plasma membrane	43.31	41.34
Os06t0627500-01	Rice	extracellular	32.88	32.73
CDX97999	Canola	extracellular	30.61	32.14
CDY19386	Canola	cytosol	29.48	31.86
CDY50822	Canola	extracellular, plasma membrane, vacuole	29.93	30.84
CDX79853	Canola	extracellular, plasma membrane, vacuole	29.71	30.61
CDX95990	Canola	extracellular, vacuole	29.48	30.16
CDY33598	Canola	extracellular, golgi	28.8	29.47
CDX83542	Canola	extracellular, plasma membrane, vacuole	31.29	29.18
CDY13577	Canola	vacuole	30.39	28.27
CDY57686	Canola	extracellular	31.07	27.57
CDY54307	Canola	extracellular	30.39	27.24
CDY20429	Canola	cytosol	8.84	27.08

Protein Annotations

Gene3D:3.80.10.10	MapMan:35.1	GO:A0A078HCJ2	UniProt:A0A078HCJ2	EnsemblPlants:CDY35199	ProteinID:CDY35199
ProteinID:CDY35199.1	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515	GO:GO:0005575	GO:GO:0016020
GO:GO:0016021	EnsemblPlantsGene:GSBRNA2T00058105001	InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt
InterPro:Leu-rich_rpt_typical-subtyp	PFAM:PF13855	PANTHER:PTHR44325	PANTHER:PTHR44325:SF3	SMART:SM00369	SUPFAM:SSF52058
SignalP:SignalP-noTM	TMHMM:TMhelix	UniParc:UPI0004EDE27E	SEG:seg	:	:

Description

BnaA01g08320DBnaA01g08320D protein [Source:UniProtKB/TrEMBL;Acc:A0A078HCJ2]

Coordinates

chrLK032348:-:86178..87503

Molecular Weight (calculated)

48139.7 Da

IEP (calculated)

5.424

GRAVY (calculated)

0.022

Length

441 amino acids

Sequence
(BLAST)

001: MATSHLHLFL FFLFTAPSTV CQENNDYAPP QLPPSEQEAV YRVLNSVNPS IPWRTTFPDD LCASPSDGVV CDYPDASSST SLHVTELHLG YVSDYTQNPP
101: CSSNSTLDPL LFTSFKHLRK LFFYKCFTGA PASLPETIPE DFGSVLEELV FIENPSLSGE VGVLIGNFTK LRRLVLTGNG FHSSIPNRIS GLVSLQEITL
201: SRNSLTGGFP ATSRLKNLKV LDFSHNSLTG NAPDSIGDLT ELLKLDLSYN AFSGEIPPGV GKLKKLEFLD LSYNRFGNYG VPLFLAEMPS LKEVYLSGNL
301: LGGRIPEIWR NLEGISGIGF SRMGLHGNIP ASMGSSLKSL WYLALDNNNL EGSIPIEFGL LDSAREINLE NNNLTGQAPF SDGFRDRVGK KLKLSGNPYL
401: LLVKESVPPL AGEVLSSSAV RALASVCFPA VFMVLYILMK Q

Best Arabidopsis Sequence Match ( AT4G28560.1 )
(BLAST)

001: MASFTNLSLL LLFLFTATLI TSQQSDDDEN ASPQLALDPS EQEAVYRVLD SVNSAISWRT IFPDDICASP PDGVVCDNLY ASQNGVATSV HVTEFHLGYL
101: SDYTQNPPCS SNATLDPLLF TAFKHLRKLF FYKCFTDARA SLPLTVPEDF GSVLEELVFI ENPSLVGEIG AMIGNFTKLR RLVLTGNGFH GSIPGQIGDL
201: VSLEEITLSR NSLTGGFPAN ATSRLKNLKV LDFSHNFING NAPDSIGDLT ELLKLDLSFN EFTGEVPSGV GNLKKLVFLD LSYNRFGNFG VPLFLAEMSS
301: LREVHLSGNK LGGRIPAIWK NLEGISGIGF SRMGLEGNIP ASMGSSLKNL CFLALDNNNL DGQIPEEFGF LDSAREINLE NNNLTGKAPF SDSFRDRIGK
401: KLKLSGNVNL QVKNSDPHLA GRALYSSARK VLPLIYFPAT LLALYISITQ

Arabidopsis Description

RIC7ROP-interactive CRIB motif-containing protein 7 [Source:UniProtKB/TrEMBL;Acc:F4JLB7]
SUBAcon: [extracellular,vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.