CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, vacuole

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 5
plasma membrane 4
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, vacuole
Any Predictor:	secretory
BaCelLo:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra004336.1-P	Field mustard	extracellular, golgi	90.26	90.26
CDY33598	Canola	extracellular, golgi	88.17	88.17
AT1G68780.1	Thale cress	extracellular, golgi	84.22	84.03
CDY20429	Canola	cytosol	28.07	84.03
CDX97999	Canola	extracellular	53.6	55.0
CDY19386	Canola	cytosol	51.97	54.9
GSMUA_Achr8P03860_001	Banana	cytosol	45.01	54.49
KRH75532	Soybean	extracellular, plasma membrane	55.68	51.61
KRH70637	Soybean	extracellular, golgi	55.68	51.5
KRG92006	Soybean	extracellular, plasma membrane	54.99	49.69
CDY13577	Canola	vacuole	54.06	49.16
CDX83542	Canola	extracellular, plasma membrane, vacuole	53.83	49.05
VIT_01s0011g02800.t01	Wine grape	extracellular	54.76	48.86
KRH34777	Soybean	extracellular, vacuole	54.06	48.64
PGSC0003DMT400002145	Potato	extracellular	52.2	48.18
Solyc05g009990.2.1	Tomato	endoplasmic reticulum, golgi, plasma membrane	51.51	47.33
GSMUA_Achr9P00780_001	Banana	cytosol	48.72	47.09
PGSC0003DMT400010384	Potato	cytosol	48.26	45.71
Solyc06g069290.2.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	48.72	45.16
GSMUA_AchrUn_...	Banana	cytosol	38.05	44.32
GSMUA_Achr10P...	Banana	cytosol	37.59	43.9
Os01t0110800-01	Rice	plasma membrane	45.71	43.78
KRH56709	Soybean	extracellular, plasma membrane	48.26	43.61
KRH03836	Soybean	extracellular, plasma membrane, vacuole	47.33	43.04
TraesCS3D01G072300.2	Wheat	endoplasmic reticulum, plasma membrane, vacuole	44.78	40.04
KXG32099	Sorghum	plasma membrane	44.32	39.63
TraesCS3D01G072400.2	Wheat	extracellular, plasma membrane	44.78	39.55
HORVU3Hr1G013160.4	Barley	vacuole	44.32	39.3
KXG32097	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	43.39	39.12
TraesCS3B01G086700.2	Wheat	extracellular, plasma membrane, vacuole	44.32	38.98
TraesCS3A01G072700.2	Wheat	extracellular	44.08	38.78
TraesCS3A01G072600.2	Wheat	extracellular	43.85	38.49
Zm00001d040130_P001	Maize	mitochondrion	47.1	38.23
CDX79853	Canola	extracellular, plasma membrane, vacuole	29.7	29.91
CDY50822	Canola	extracellular, plasma membrane, vacuole	29.7	29.91
CDY35199	Canola	extracellular, plasma membrane	30.16	29.48
CDY38378	Canola	extracellular	28.77	27.93
CDY54307	Canola	extracellular	31.32	27.44
CDY57686	Canola	extracellular	31.32	27.16
HORVU1Hr1G008420.1	Barley	extracellular	7.42	23.7

Protein Annotations

EnsemblPlants:CDX95990	EnsemblPlantsGene:GSBRNA2T00102016001	Gene3D:3.80.10.10	InterPro:IPR032675	InterPro:LRR_dom_sf	PANTHER:PTHR44325
PANTHER:PTHR44325:SF1	ProteinID:CDX95990	ProteinID:CDX95990.1	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF52058
UniParc:UPI0004EEBD90	MapMan:35.1	:	:	:	:

Description

BnaA07g27410D

Coordinates

chrLK031892:+:483161..485224

Molecular Weight (calculated)

48285.6 Da

IEP (calculated)

8.078

GRAVY (calculated)

-0.085

Length

431 amino acids

Sequence
(BLAST)

001: MLRFTKKQQL CFLLCVWCLV VNWSSAETEE SEGGPMEKTE KAALYSTVQG FVGDSWNGSY LFPDPCGWTP FQGVTCDLFD DLWYVTALSF GSMRDNSLAC
101: TEIPVIRPQL FELKHLKSLS LFNCFTSPNQ YLASVSDEKW LDLSKNLETL EIRSNPGLIG ELPSFITSLT NLQSLVVLEN RLTGLLPENL AKLTRLRRLV
201: LSGNRFTGRI PEVYGLTGLL ILDLSRNFFS GPLPLSVGGL SSLLKLDVSN NYLEGKVPIE LQSLKNLTLL DLRNNRFSGG LTKEIQKMSS LVELVLSNNH
301: LEGDLTGIEW RNLKNLVVLD LSNTGLNGEI PWSILELKKL RFLGLSNNSL GGKLFPQMET KMPCLNALYV NGNNISGELK FSKKFYERMG RRLGAWGNPN
401: LCYHGDEIKN LRDHAPFGVN QCKRMKAVTL A

Best Arabidopsis Sequence Match ( AT1G68780.1 )
(BLAST)

001: MKMLRLRKKQ HLVFLLCVWC LVVDWSKAET EESDGSPMEK TEQAALYSTI QGFVGESWNG SYLYPDPCGW TPIQGVTCDI YDELWYVTAL SFGTMKDNSL
101: ACSESPVIRP QLFELKHLKS LSLFNCFTTP NRYLASISDE KWLDLSKSLE RLEIRSNPGL IGELPSVITN LTNLQSLVVL ENKLTGPLPV NLAKLTRLRR
201: LVLSGNRFTG RIPEVYGLTG LLILDVSRNF LSGALPLSVG GLYSLLKLDL SNNYLEGKLP RELESLKNLT LLDLRNNRLS GGLSKEIQEM TSLVELVLSN
301: NRLAGDLTGI KWRNLKNLVV LDLSNTGLKG EIPGSILELK KLRFLGLSNN NLGGKLIPQM ETEMPSLSAL YVNGNNISGE LEFSRYFYER MGRRLGVWGN
401: PNLCYNGDET KNLSDHVPFG VNQCKRIKAD KY

Arabidopsis Description

At1g68780 [Source:UniProtKB/TrEMBL;Acc:Q9CA41]
SUBAcon: [golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.