Factsheet for Bra004336.1-P

Subcellular Localization

min:

: max

Winner_takes_all: extracellular, golgi

Predictor Summary:

extracellular 6
golgi 5
plasma membrane 4
endoplasmic reticulum 4
vacuole 4
nucleus 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, golgi
Any Predictor:	nucleus, plastid, secretory
BaCelLo:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular, nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	golgi

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY33598	Canola	extracellular, golgi	93.04	93.04
CDX95990	Canola	extracellular, vacuole	90.26	90.26
CDY20429	Canola	cytosol	28.31	84.72
AT1G68780.1	Thale cress	extracellular, golgi	78.42	78.24
GSMUA_Achr8P03860_001	Banana	cytosol	45.71	55.34
KRH75532	Soybean	extracellular, plasma membrane	56.61	52.47
KRH70637	Soybean	extracellular, golgi	56.15	51.93
KRG92006	Soybean	extracellular, plasma membrane	55.68	50.31
KRH34777	Soybean	extracellular, vacuole	55.22	49.69
PGSC0003DMT400002145	Potato	extracellular	53.36	49.25
VIT_01s0011g02800.t01	Wine grape	extracellular	54.52	48.65
Bra025154.1-P	Field mustard	extracellular, plasma membrane, vacuole	53.13	48.31
Solyc05g009990.2.1	Tomato	endoplasmic reticulum, golgi, plasma membrane	51.74	47.55
GSMUA_Achr9P00780_001	Banana	cytosol	49.19	47.53
Solyc06g069290.2.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	50.35	46.67
PGSC0003DMT400010384	Potato	cytosol	49.19	46.59
Os01t0110800-01	Rice	plasma membrane	46.64	44.67
GSMUA_AchrUn_...	Banana	cytosol	38.28	44.59
GSMUA_Achr10P...	Banana	cytosol	38.05	44.44
KRH56709	Soybean	extracellular, plasma membrane	48.96	44.23
KRH03836	Soybean	extracellular, plasma membrane, vacuole	48.26	43.88
TraesCS3D01G072300.2	Wheat	endoplasmic reticulum, plasma membrane, vacuole	45.48	40.66
TraesCS3D01G072400.2	Wheat	extracellular, plasma membrane	45.48	40.16
HORVU3Hr1G013160.4	Barley	vacuole	45.24	40.12
KXG32099	Sorghum	plasma membrane	44.32	39.63
TraesCS3B01G086700.2	Wheat	extracellular, plasma membrane, vacuole	45.01	39.59
TraesCS3A01G072700.2	Wheat	extracellular	44.55	39.18
KXG32097	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	43.39	39.12
TraesCS3A01G072600.2	Wheat	extracellular	44.32	38.9
Zm00001d040130_P001	Maize	mitochondrion	47.56	38.61
Bra004719.1-P	Field mustard	extracellular, plasma membrane, vacuole	30.86	29.3
Bra011040.1-P	Field mustard	extracellular, plasma membrane	29.23	28.57
Bra003549.1-P	Field mustard	extracellular	31.55	27.36
HORVU1Hr1G008420.1	Barley	extracellular	7.42	23.7
Bra003550.1-P	Field mustard	extracellular	5.8	20.16
Bra019819.1-P	Field mustard	nucleus	52.9	15.17

Protein Annotations

EnsemblPlants:Bra004336.1	EnsemblPlants:Bra004336.1-P	EnsemblPlantsGene:Bra004336	Gene3D:3.80.10.10	InterPro:IPR032675	InterPro:LRR_dom_sf
PANTHER:PTHR44325	PANTHER:PTHR44325:SF1	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF52058	UniParc:UPI00025417BA
UniProt:M4CJF2	MapMan:35.1	:	:	:	:

Description

AT1G68780 (E=1e-199) | leucine-rich repeat family protein

Coordinates

chrA07:-:18071254..18072912

Molecular Weight (calculated)

48224.5 Da

IEP (calculated)

7.921

GRAVY (calculated)

-0.088

Length

431 amino acids

Sequence
(BLAST)

001: MLRFTKKQQL YFLLCVWCLV VNWSSAETEE SEGGPMEKTE KAALYSTVQG FVGDSWNGSY LFPDPCGWTP IQGVTCDLFD DLWYVTALSF GSMRDNSLAC
101: TEIPVIRPQL FELKHLKSLS LFNCFTSPNQ YLASGSDEKW LDLSKSLETL EIRSNPGLIG ELPSFITSLT NLQSLVVLEN RLTGSLPEKL AKLTRLRRLV
201: LSGNRFTGRI PEVYGLTGLL ILDLSRNFFS GSLPLSVGGL SSLLKLDVSN NYLEGKVPIE LQFLKNLTLL DLRNNRFSGG LTKEIQEMSS LVELVLSNNH
301: LEGDLTGIEW RNLKNLVVLD LSNTGLKGEI PWSILELKKL RFLGLSNNSL GGKLFPQMET KMPCLNALYV NGNNISGELG FSKKFYERMG RRLGAWGNPN
401: LCYHGDEIKN LRDHAPFGVN QCKRMKAVTL A

Best Arabidopsis Sequence Match ( AT1G68780.1 )
(BLAST)

001: MKMLRLRKKQ HLVFLLCVWC LVVDWSKAET EESDGSPMEK TEQAALYSTI QGFVGESWNG SYLYPDPCGW TPIQGVTCDI YDELWYVTAL SFGTMKDNSL
101: ACSESPVIRP QLFELKHLKS LSLFNCFTTP NRYLASISDE KWLDLSKSLE RLEIRSNPGL IGELPSVITN LTNLQSLVVL ENKLTGPLPV NLAKLTRLRR
201: LVLSGNRFTG RIPEVYGLTG LLILDVSRNF LSGALPLSVG GLYSLLKLDL SNNYLEGKLP RELESLKNLT LLDLRNNRLS GGLSKEIQEM TSLVELVLSN
301: NRLAGDLTGI KWRNLKNLVV LDLSNTGLKG EIPGSILELK KLRFLGLSNN NLGGKLIPQM ETEMPSLSAL YVNGNNISGE LEFSRYFYER MGRRLGVWGN
401: PNLCYNGDET KNLSDHVPFG VNQCKRIKAD KY

Arabidopsis Description

At1g68780 [Source:UniProtKB/TrEMBL;Acc:Q9CA41]
SUBAcon: [extracellular,golgi]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.