Factsheet for Bra025154.1-P

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular, vacuole

Predictor Summary:

nucleus 2
extracellular 6
endoplasmic reticulum 4
vacuole 5
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane, vacuole
Any Predictor:	nucleus, secretory
BaCelLo:	nucleus
iPSORT:	secretory
MultiLoc:	extracellular
Plant-mPloc:	extracellular, nucleus
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY13577	Canola	vacuole	98.52	98.52
CDX83542	Canola	extracellular, plasma membrane, vacuole	97.68	97.89
AT3G25670.1	Thale cress	extracellular	76.58	76.42
Bra004336.1-P	Field mustard	extracellular, golgi	48.31	53.13
GSMUA_Achr8P03860_001	Banana	cytosol	39.87	53.09
KRH70637	Soybean	extracellular, golgi	51.48	52.36
KRH75532	Soybean	extracellular, plasma membrane	50.84	51.83
KRG92006	Soybean	extracellular, plasma membrane	51.9	51.57
KRH34777	Soybean	extracellular, vacuole	50.84	50.31
VIT_01s0011g02800.t01	Wine grape	extracellular	50.42	49.48
PGSC0003DMT400002145	Potato	extracellular	48.52	49.25
Solyc05g009990.2.1	Tomato	endoplasmic reticulum, golgi, plasma membrane	46.84	47.33
GSMUA_Achr9P00780_001	Banana	cytosol	44.09	46.86
Solyc06g069290.2.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	44.73	45.59
PGSC0003DMT400010384	Potato	cytosol	43.67	45.49
GSMUA_Achr10P...	Banana	cytosol	34.81	44.72
GSMUA_AchrUn_...	Banana	cytosol	34.81	44.59
KRH56709	Soybean	extracellular, plasma membrane	44.73	44.44
KRH03836	Soybean	extracellular, plasma membrane, vacuole	43.67	43.67
Os01t0110800-01	Rice	plasma membrane	39.24	41.33
KXG32097	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	40.93	40.59
TraesCS3D01G072400.2	Wheat	extracellular, plasma membrane	41.77	40.57
KXG32099	Sorghum	plasma membrane	40.93	40.25
TraesCS3D01G072300.2	Wheat	endoplasmic reticulum, plasma membrane, vacuole	40.72	40.04
TraesCS3A01G072700.2	Wheat	extracellular	40.93	39.59
HORVU3Hr1G013160.4	Barley	vacuole	40.3	39.3
TraesCS3B01G086700.2	Wheat	extracellular, plasma membrane, vacuole	40.51	39.18
TraesCS3A01G072600.2	Wheat	extracellular	40.3	38.9
Zm00001d040130_P001	Maize	mitochondrion	42.41	37.85
HORVU1Hr1G008420.1	Barley	extracellular	9.49	33.33
Bra011040.1-P	Field mustard	extracellular, plasma membrane	28.48	30.61
Bra004719.1-P	Field mustard	extracellular, plasma membrane, vacuole	28.9	30.18
Bra003549.1-P	Field mustard	extracellular	29.11	27.77
Bra019819.1-P	Field mustard	nucleus	59.49	18.76
Bra003550.1-P	Field mustard	extracellular	4.64	17.74

Protein Annotations

EnsemblPlants:Bra025154.1	EnsemblPlants:Bra025154.1-P	EnsemblPlantsGene:Bra025154	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	PANTHER:PTHR44325
PANTHER:PTHR44325:SF1	PFAM:PF13855	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF52058	UniParc:UPI000253F784
UniProt:M4E8P8	MapMan:35.1	:	:	:	:

Description

AT3G25670 (E=2e-199) | leucine-rich repeat family protein

Coordinates

chrA06:+:23134388..23136224

Molecular Weight (calculated)

52504.8 Da

IEP (calculated)

5.564

GRAVY (calculated)

0.023

Length

474 amino acids

Sequence
(BLAST)

001: MSWIHSVLFL FLVFRWCIAG ESSSPEVTDD GAPMEISERE ALYSTIQGFL GDSWNGSDLY PDPCGWTPIQ GVSCDLYDDL WYVTELTLGL VHENSLACAA
101: SLEIKPQLFK LKHLKSLSFV KCFTSSLTIS KEDWISLGSN LESLEFRSNP GLIGELPETF GSLTNLKSLV VLENGFNGKL PTSLCNLSSL KRFVLAGNLF
201: TGTIPDCFNG FKDLLILDLS RNSFSGTLPS TIGEMVSLLK LDLSNNQLEG KLPQGISFLK NLTLLDVRNN RISGGFSQNV EKIRSLTDLV LSGNPMDIDD
301: MMGIKWENMG SLVVLDLSKM GLRGDIPYGL TKLKRLRFLG LNDNELTGTV PSKELETLPC LGALYIHGNN LTGELRFSTK FYEKMGTRFK ASKNPNLCQY
401: DIVSESRSYV PPLGLKPCSK MKKTEGGLVI LQTLRNLKKE ESSSSMSLMV TRRVLSNGLT WDLLLELSLI VLLI

Best Arabidopsis Sequence Match ( AT3G25670.1 )
(BLAST)

001: MSWIHLVLFL CLTLLCCVTG ELSPEGTDDG APMEKTEQEA LYSAIQGFVG DSWNGSDLYP DPCGWTPIQG VSCDLYGDLW YVTDLTLGLV HENSLSCATS
101: LEIKPQLFKL KHLKSLTFFN CFTSPIRIPK EDWINLASNL ESLEFRSNPG LIGELPETIG SLTKLKSLVV LENGFNGKLP TRICNLTRLK RLVLAGNLFT
201: GTIPDCFNGF KDLLILDMSR NSFSGILPLS VGEMVSLLKL DLSNNQLEGR LPQEIGFLKN LTLLDLRNNR ISGGLFENIE KIPSLTDLVL SGNPMGSDDM
301: MGIKWENMGN LVILDLSKMG LRGEVPLGLT SLRRLRFLGL NDNNLTGTVP SKELETLPCL GALYINGNNL SGELRFSRKF YEKMGTRFKA SKNPNLCQDV
401: VSESRQYVVG LKSCMMEKAE DSLVIKQTWS NLKKEDESSS SMGVMVTRHV LLSNGFMWDL LLELSLILLL NLLVC

Arabidopsis Description

Leucine-rich repeat (LRR) family protein [Source:UniProtKB/TrEMBL;Acc:F4JA38]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.