Skip to main content
crop-pal logo
Canola
Search for another protein from :
Canola
Subcellular Localization
min:
: max

 
Winner_takes_all: vacuole

Predictor Summary:
  • extracellular 6
  • endoplasmic reticulum 5
  • vacuole 7
  • plasma membrane 5
  • golgi 5
Predictors GFP MS/MS Papers
Winner Takes All:vacuole
Any Predictor:secretory
BaCelLo:secretory
iPSORT:secretory
MultiLoc:extracellular
Predotar:secretory
PProwler:secretory
TargetP:secretory
WoLF PSORT:vacuole
YLoc:vacuole
PPI
No PPI Data
Homology

Paralog

locusIdentityHomology Identity

Ortholog

locusHomology SpeciesLocationIdentityHomology Identity
Bra025154.1-P Field mustard extracellular, plasma membrane, vacuole 98.52 98.52
CDX83542 Canola extracellular, plasma membrane, vacuole 97.47 97.67
AT3G25670.1 Thale cress extracellular 76.58 76.42
CDY19386 Canola cytosol 59.7 69.36
CDX97999 Canola extracellular 60.97 68.81
CDX95990 Canola extracellular, vacuole 49.16 54.06
GSMUA_Achr8P03860_001 Banana cytosol 39.87 53.09
CDY33598 Canola extracellular, golgi 47.68 52.44
KRH70637 Soybean extracellular, golgi 51.48 52.36
KRH75532 Soybean extracellular, plasma membrane 50.84 51.83
KRG92006 Soybean extracellular, plasma membrane 51.9 51.57
KRH34777 Soybean extracellular, vacuole 50.84 50.31
VIT_01s0011g02800.t01 Wine grape extracellular 50.63 49.69
PGSC0003DMT400002145 Potato extracellular 48.52 49.25
Solyc05g009990.2.1 Tomato endoplasmic reticulum, golgi, plasma membrane 46.84 47.33
GSMUA_Achr9P00780_001 Banana cytosol 44.3 47.09
Solyc06g069290.2.1 Tomato endoplasmic reticulum, extracellular, plasma membrane 44.94 45.81
PGSC0003DMT400010384 Potato cytosol 43.88 45.71
GSMUA_Achr10P... Banana cytosol 35.02 44.99
KRH56709 Soybean extracellular, plasma membrane 44.94 44.65
GSMUA_AchrUn_... Banana cytosol 34.81 44.59
KRH03836 Soybean extracellular, plasma membrane, vacuole 43.88 43.88
CDY20429 Canola cytosol 12.87 42.36
Os01t0110800-01 Rice plasma membrane 39.24 41.33
TraesCS3D01G072400.2 Wheat extracellular, plasma membrane 42.19 40.98
KXG32097 Sorghum endoplasmic reticulum, extracellular, plasma membrane 40.93 40.59
TraesCS3D01G072300.2 Wheat endoplasmic reticulum, plasma membrane, vacuole 41.14 40.46
KXG32099 Sorghum plasma membrane 40.93 40.25
TraesCS3A01G072700.2 Wheat extracellular 41.35 40.0
HORVU3Hr1G013160.4 Barley vacuole 40.72 39.71
TraesCS3B01G086700.2 Wheat extracellular, plasma membrane, vacuole 40.93 39.59
TraesCS3A01G072600.2 Wheat extracellular 40.72 39.31
Zm00001d040130_P001 Maize mitochondrion 42.41 37.85
HORVU1Hr1G008420.1 Barley extracellular 9.49 33.33
CDX79853 Canola extracellular, plasma membrane, vacuole 27.64 30.61
CDY35199 Canola extracellular, plasma membrane 28.27 30.39
CDY50822 Canola extracellular, plasma membrane, vacuole 27.43 30.37
CDY38378 Canola extracellular 28.27 30.18
CDY54307 Canola extracellular 29.11 28.05
CDY57686 Canola extracellular 28.9 27.57
Protein Annotations
EnsemblPlants:CDY13577EnsemblPlantsGene:GSBRNA2T00077977001Gene3D:3.80.10.10GO:GO:0003674GO:GO:0005488GO:GO:0005515
InterPro:IPR001611InterPro:IPR032675InterPro:LRR_dom_sfInterPro:Leu-rich_rptPANTHER:PTHR44325PANTHER:PTHR44325:SF1
PFAM:PF13855ProteinID:CDY13577ProteinID:CDY13577.1SEG:segSignalP:SignalP-noTMSUPFAM:SSF52058
UniParc:UPI0004EF2E16UniProt:A0A078FKS7MapMan:35.1:::
Description
BnaA06g33460DBnaA06g33460D protein [Source:UniProtKB/TrEMBL;Acc:A0A078FKS7]
Coordinates
chrLK032037:-:10857..12869
Molecular Weight (calculated)
52486.9 Da
IEP (calculated)
5.564
GRAVY (calculated)
0.037
Length
474 amino acids
Sequence
(BLAST)
001: MSWIHSVLFL FLVFRWCIAV ESSSPEVTDD GAPMEISERE ALYSTIQGFV GDSWNGSDLY PDPCGWTPIQ GVSCDLYDDL WYVTELTLGL VHENSLACAA
101: SLETKPQLFK LKHLKSLSFV KCFTSSLTIS KEDWISLGSN LESLEFRSNP GLIGELPETF GSLTNLKSLV VLENGFNGKL PTSLCNLSSL KRLVLAGNLF
201: TGTIPDCFNG FKDLLILDLS RNSFSGTLPS TIGEMVSLLK LDLSNNQLEG KLPQGIGFLK NLTLLDVRNN RISGGFSQNV EKIRALTDLV LSGNPMDIDD
301: MMGIKWENMG SLVVLDLSKM GLRCDIPYGL TKLKRLRFLG LNDNELTGTV PSKELETLPC LGALYIHGNN LTGELRFSTK FYEKMGTRFK ASKNPNLCQY
401: DIVSESRSYV PPLGLKPCSK MKKTEGGLVI LQTLRNLKKE ESSSSMSLMV TRRVLSNGLT WDLLLELSLI VLLI
Best Arabidopsis Sequence Match ( AT3G25670.1 )
(BLAST)
001: MSWIHLVLFL CLTLLCCVTG ELSPEGTDDG APMEKTEQEA LYSAIQGFVG DSWNGSDLYP DPCGWTPIQG VSCDLYGDLW YVTDLTLGLV HENSLSCATS
101: LEIKPQLFKL KHLKSLTFFN CFTSPIRIPK EDWINLASNL ESLEFRSNPG LIGELPETIG SLTKLKSLVV LENGFNGKLP TRICNLTRLK RLVLAGNLFT
201: GTIPDCFNGF KDLLILDMSR NSFSGILPLS VGEMVSLLKL DLSNNQLEGR LPQEIGFLKN LTLLDLRNNR ISGGLFENIE KIPSLTDLVL SGNPMGSDDM
301: MGIKWENMGN LVILDLSKMG LRGEVPLGLT SLRRLRFLGL NDNNLTGTVP SKELETLPCL GALYINGNNL SGELRFSRKF YEKMGTRFKA SKNPNLCQDV
401: VSESRQYVVG LKSCMMEKAE DSLVIKQTWS NLKKEDESSS SMGVMVTRHV LLSNGFMWDL LLELSLILLL NLLVC
Arabidopsis Description
Leucine-rich repeat (LRR) family protein [Source:UniProtKB/TrEMBL;Acc:F4JA38]
SUBAcon: [extracellular]
Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.