Factsheet for GSMUA_Achr9P00780_001

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
GSMUA_Achr8P03860_001	Banana	cytosol	51.79	64.89
GSMUA_AchrUn_...	Banana	cytosol	49.55	59.73
GSMUA_Achr10P...	Banana	cytosol	49.1	59.35
VIT_01s0011g02800.t01	Wine grape	extracellular	54.93	50.72
AT1G68780.1	Thale cress	extracellular, golgi	48.21	49.77
AT1G13230.1	Thale cress	extracellular	47.09	49.53
Bra004336.1-P	Field mustard	extracellular, golgi	47.53	49.19
CDY19386	Canola	cytosol	44.84	49.02
KRH70637	Soybean	extracellular, golgi	51.12	48.93
CDX95990	Canola	extracellular, vacuole	47.09	48.72
CDY33598	Canola	extracellular, golgi	47.09	48.72
KRH75532	Soybean	extracellular, plasma membrane	50.45	48.39
CDX97999	Canola	extracellular	45.29	48.1
PGSC0003DMT400002145	Potato	extracellular	49.78	47.54
Solyc05g009990.2.1	Tomato	endoplasmic reticulum, golgi, plasma membrane	49.78	47.33
KRG92006	Soybean	extracellular, plasma membrane	50.22	46.96
KRH34777	Soybean	extracellular, vacuole	49.78	46.35
KRH03836	Soybean	extracellular, plasma membrane, vacuole	48.21	45.36
KRH56709	Soybean	extracellular, plasma membrane	48.43	45.28
PGSC0003DMT400010384	Potato	cytosol	46.19	45.27
CDY20429	Canola	cytosol	14.57	45.14
CDX83542	Canola	extracellular, plasma membrane, vacuole	47.53	44.82
Solyc06g069290.2.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	46.64	44.73
CDY13577	Canola	vacuole	47.09	44.3
Bra025154.1-P	Field mustard	extracellular, plasma membrane, vacuole	46.86	44.09
AT3G25670.1	Thale cress	extracellular	46.19	43.37
GSMUA_Achr4P15510_001	Banana	cytosol	29.6	31.21
GSMUA_Achr7P24750_001	Banana	cytosol	32.29	30.0
GSMUA_AchrUn_...	Banana	extracellular, plasma membrane	28.7	27.71
GSMUA_Achr7P01190_001	Banana	extracellular	15.92	15.78
Bra019819.1-P	Field mustard	nucleus	45.29	13.44

Protein Annotations

EnsemblPlants:GSMUA_Achr9P00780_001	EnsemblPlants:GSMUA_Achr9T00780_001	EnsemblPlantsGene:GSMUA_Achr9G00780_001	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp
PANTHER:PTHR44325	PANTHER:PTHR44325:SF1	PFAM:PF13855	PRINTS:PR00019	SEG:seg	SMART:SM00369
SUPFAM:SSF52058	UniParc:UPI000294F44E	UniProt:M0TWD5	MapMan:35.1	:	:

Description

Piriformospora indica-insensitive protein 2 [Source:GMGC_GENE;Acc:GSMUA_Achr9G00780_001]

Coordinates

chr9:+:582625..584241

Molecular Weight (calculated)

48782.7 Da

IEP (calculated)

6.423

GRAVY (calculated)

-0.027

Length

446 amino acids

Sequence
(BLAST)

001: MQRTEQEALY LVIQDVVGKR WNGSQLYPDP CGWTQIQGVS CDLFDGMWYV TGLSIGPLLD GSLECAEDAV FSPLLFELKH LRRLSFLGCF SSHRQTTIPS
101: RHWEKLAGSL ETLEFRSNQG LVGEVPADLA QLTRLQSLVL VDNSLSGELP RELGNLARLK RLALAGNRFC GYIPASLGSN MAELLILDLS RNSLTGSLPS
201: SLGHLASLLK LDLSHNLLNG SIPSELGSLR SLTLLDLRNN ELSGVLARAH TLHRMVSLQD LLLSDNPLGG SLSEVQWENL ANLTTLDLSR ANLSGAIPES
301: IAGLKRLRFL ALDNNRLSGS VSPKLATLPS LTALYLNGNN LTGELRFSDE FYRRMGRRSA FWDNPYLCHG SVGMPTGVEQ CKQAQQTSNP EDKAAYDGNP
401: GKSWNMSTSF GLPASSISAW WGVGVRESVV ALLLVMLLET LLIMHP

Best Arabidopsis Sequence Match ( AT1G68780.1 )
(BLAST)

001: MKMLRLRKKQ HLVFLLCVWC LVVDWSKAET EESDGSPMEK TEQAALYSTI QGFVGESWNG SYLYPDPCGW TPIQGVTCDI YDELWYVTAL SFGTMKDNSL
101: ACSESPVIRP QLFELKHLKS LSLFNCFTTP NRYLASISDE KWLDLSKSLE RLEIRSNPGL IGELPSVITN LTNLQSLVVL ENKLTGPLPV NLAKLTRLRR
201: LVLSGNRFTG RIPEVYGLTG LLILDVSRNF LSGALPLSVG GLYSLLKLDL SNNYLEGKLP RELESLKNLT LLDLRNNRLS GGLSKEIQEM TSLVELVLSN
301: NRLAGDLTGI KWRNLKNLVV LDLSNTGLKG EIPGSILELK KLRFLGLSNN NLGGKLIPQM ETEMPSLSAL YVNGNNISGE LEFSRYFYER MGRRLGVWGN
401: PNLCYNGDET KNLSDHVPFG VNQCKRIKAD KY

Arabidopsis Description

At1g68780 [Source:UniProtKB/TrEMBL;Acc:Q9CA41]
SUBAcon: [golgi,extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.