Factsheet for TraesCS3D01G072400.2

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 5
golgi 4
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	plastid, secretory
iPSORT:	secretory
MultiLoc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3D01G072300.2	Wheat	endoplasmic reticulum, plasma membrane, vacuole	85.66	86.72
Os01t0110800-01	Rice	plasma membrane	61.48	66.67
KXG32097	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	62.91	64.23
KXG32099	Sorghum	plasma membrane	63.11	63.9
Zm00001d040130_P001	Maize	mitochondrion	66.6	61.21
GSMUA_Achr8P03860_001	Banana	cytosol	43.03	58.99
AT1G13230.1	Thale cress	extracellular	40.16	46.23
CDY19386	Canola	cytosol	38.32	45.83
KRH75532	Soybean	extracellular, plasma membrane	43.65	45.81
KRH70637	Soybean	extracellular, golgi	43.65	45.71
Bra004336.1-P	Field mustard	extracellular, golgi	40.16	45.48
Solyc05g009990.2.1	Tomato	endoplasmic reticulum, golgi, plasma membrane	43.65	45.42
CDX97999	Canola	extracellular	38.93	45.24
PGSC0003DMT400002145	Potato	extracellular	43.24	45.18
AT1G68780.1	Thale cress	extracellular, golgi	39.96	45.14
CDX95990	Canola	extracellular, vacuole	39.55	44.78
VIT_01s0011g02800.t01	Wine grape	extracellular	44.26	44.72
CDY33598	Canola	extracellular, golgi	38.93	44.08
KRG92006	Soybean	extracellular, plasma membrane	43.03	44.03
Solyc06g069290.2.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	41.8	43.87
PGSC0003DMT400010384	Potato	cytosol	40.78	43.74
KRH56709	Soybean	extracellular, plasma membrane	42.62	43.61
KRH03836	Soybean	extracellular, plasma membrane, vacuole	42.01	43.25
KRH34777	Soybean	extracellular, vacuole	41.8	42.59
AT3G25670.1	Thale cress	extracellular	41.39	42.53
CDY13577	Canola	vacuole	40.98	42.19
CDX83542	Canola	extracellular, plasma membrane, vacuole	40.78	42.07
Bra025154.1-P	Field mustard	extracellular, plasma membrane, vacuole	40.57	41.77
CDY20429	Canola	cytosol	11.27	38.19
TraesCS2D01G355900.1	Wheat	plasma membrane	30.12	30.0
TraesCS1D01G353700.1	Wheat	extracellular, vacuole	15.78	17.62
TraesCS5D01G384300.1	Wheat	plasma membrane	15.57	16.67
TraesCS3D01G282900.1	Wheat	extracellular, plasma membrane	13.93	15.14
Bra019819.1-P	Field mustard	nucleus	38.32	12.44

Protein Annotations

EnsemblPlants:TraesCS3D01G072400.2	EnsemblPlantsGene:TraesCS3D01G072400	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	PANTHER:PTHR44325	PANTHER:PTHR44325:SF1
PFAM:PF13855	PFscan:PS51257	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF52058	MapMan:35.1

Description

No Description!

Coordinates

chr3D:-:32418800..32421383

Molecular Weight (calculated)

50890.8 Da

IEP (calculated)

5.539

GRAVY (calculated)

0.115

Length

488 amino acids

Sequence
(BLAST)

001: MRRARGGRLL LPLAALFLAL LLLSGCAAEG EHEEGSPVAA EEPEAPMEDK EKAALYAAIG GFVGKAWNGS GLFPDPCGQT PIQGVSCDLF NGLWYPTVVS
101: IGPVLDNSLQ CAPDARFSPQ LFDLRRLKSL TFYACFPAAN PTAIPAASWD KLAGTLETLE FRSNPGLSGA IPASLGRLGS LQSLVLVDNN LTGAVPPELG
201: GLAKLRRLVL SGNGLSGPVP ATLGNDNTQL RRLDELLIMD MSKNSLTGSL PPSLGGLKGL LKMDLSNNRL DGRIPPELAG LESLTLLDLR NNSLTGGLPG
301: FVLGMAALQD LLLSSNPLLG GTLMQRGWEK MASLATLDLS NVGLAGAIPE SMAAMPRLRF LALDHNRLSG PVPAKLAALP SIGAMYLNGN NLTGALEFSP
401: AFYQRMGTRF ASWDNPGLCT AETAGGAPAG VAVCKDAQDP PRVGVRDRMD GGGRKPEASS SLPASSSSAG MVTVLWWSVL AQGMAMAL

Best Arabidopsis Sequence Match ( AT3G25670.1 )
(BLAST)

001: MSWIHLVLFL CLTLLCCVTG ELSPEGTDDG APMEKTEQEA LYSAIQGFVG DSWNGSDLYP DPCGWTPIQG VSCDLYGDLW YVTDLTLGLV HENSLSCATS
101: LEIKPQLFKL KHLKSLTFFN CFTSPIRIPK EDWINLASNL ESLEFRSNPG LIGELPETIG SLTKLKSLVV LENGFNGKLP TRICNLTRLK RLVLAGNLFT
201: GTIPDCFNGF KDLLILDMSR NSFSGILPLS VGEMVSLLKL DLSNNQLEGR LPQEIGFLKN LTLLDLRNNR ISGGLFENIE KIPSLTDLVL SGNPMGSDDM
301: MGIKWENMGN LVILDLSKMG LRGEVPLGLT SLRRLRFLGL NDNNLTGTVP SKELETLPCL GALYINGNNL SGELRFSRKF YEKMGTRFKA SKNPNLCQDV
401: VSESRQYVVG LKSCMMEKAE DSLVIKQTWS NLKKEDESSS SMGVMVTRHV LLSNGFMWDL LLELSLILLL NLLVC

Arabidopsis Description

Leucine-rich repeat (LRR) family protein [Source:UniProtKB/TrEMBL;Acc:F4JA38]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.