Factsheet for TraesCS3D01G072300.2

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane

Predictor Summary:

extracellular 4
endoplasmic reticulum 5
vacuole 5
plasma membrane 5
golgi 4

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	vacuole
YLoc:	plasma membrane

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3B01G086700.2	Wheat	extracellular, plasma membrane, vacuole	90.87	89.39
TraesCS3A01G072600.2	Wheat	extracellular	88.59	86.97
TraesCS3D01G072400.2	Wheat	extracellular, plasma membrane	86.72	85.66
TraesCS3A01G072700.2	Wheat	extracellular	83.4	82.04
HORVU3Hr1G013160.4	Barley	vacuole	82.37	81.69
Os01t0110800-01	Rice	plasma membrane	59.75	64.0
KXG32097	Sorghum	endoplasmic reticulum, extracellular, plasma membrane	61.62	62.13
KXG32099	Sorghum	plasma membrane	61.41	61.41
Zm00001d040130_P001	Maize	mitochondrion	65.77	59.7
GSMUA_Achr8P03860_001	Banana	cytosol	43.36	58.71
HORVU1Hr1G008420.1	Barley	extracellular	15.15	54.07
AT1G13230.1	Thale cress	extracellular	40.25	45.75
AT1G68780.1	Thale cress	extracellular, golgi	40.87	45.6
CDY19386	Canola	cytosol	38.59	45.59
Bra004336.1-P	Field mustard	extracellular, golgi	40.66	45.48
KRH75532	Soybean	extracellular, plasma membrane	43.78	45.38
Solyc06g069290.2.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	43.57	45.16
KRH70637	Soybean	extracellular, golgi	43.57	45.06
CDX97999	Canola	extracellular	39.21	45.0
PGSC0003DMT400010384	Potato	cytosol	42.32	44.84
CDX95990	Canola	extracellular, vacuole	40.04	44.78
PGSC0003DMT400002145	Potato	extracellular	43.15	44.54
Solyc05g009990.2.1	Tomato	endoplasmic reticulum, golgi, plasma membrane	43.15	44.35
CDY33598	Canola	extracellular, golgi	39.63	44.32
VIT_01s0011g02800.t01	Wine grape	extracellular	43.98	43.89
KRG92006	Soybean	extracellular, plasma membrane	42.95	43.4
KRH56709	Soybean	extracellular, plasma membrane	42.32	42.77
KRH03836	Soybean	extracellular, plasma membrane, vacuole	41.91	42.62
AT3G25670.1	Thale cress	extracellular	41.91	42.53
KRH34777	Soybean	extracellular, vacuole	41.7	41.96
CDX83542	Canola	extracellular, plasma membrane, vacuole	40.46	41.23
CDY13577	Canola	vacuole	40.46	41.14
Bra025154.1-P	Field mustard	extracellular, plasma membrane, vacuole	40.04	40.72
CDY20429	Canola	cytosol	11.2	37.5
TraesCS2D01G355900.1	Wheat	plasma membrane	29.25	28.78
TraesCS1D01G353700.1	Wheat	extracellular, vacuole	15.77	17.39
TraesCS5D01G384300.1	Wheat	plasma membrane	15.77	16.67
TraesCS3D01G282900.1	Wheat	extracellular, plasma membrane	15.15	16.26
Bra019819.1-P	Field mustard	nucleus	38.17	12.24

Protein Annotations

EnsemblPlants:TraesCS3D01G072300.2	EnsemblPlantsGene:TraesCS3D01G072300	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	PANTHER:PTHR44325	PANTHER:PTHR44325:SF1
PFAM:PF13855	PFscan:PS51257	SEG:seg	SignalP:SignalP-noTM	SUPFAM:SSF52058	MapMan:35.1

Description

No Description!

Coordinates

chr3D:+:32342525..32345167

Molecular Weight (calculated)

50191.1 Da

IEP (calculated)

7.658

GRAVY (calculated)

0.138

Length

482 amino acids

Sequence
(BLAST)

001: MKRARGGRLL LPLAALFLAL LLISGCAAEG EDDEGTPVAA EAPMEDKEKA ALYAAIGGFV GKAWNGSGLF PDPCGQTPIQ GVSCDLLNGL WYPTVVSIGP
101: VLDNSLQCAP DARFSPQLFD LRRLKSLTFY ACFPPTNPTA IPATNWDKLS GTLETLEFRS NPGLAGAIPA SLGRLASLQS LVLVDNNLTG AVPPKLGGLA
201: KLRRLVLSGN GLSGPVPATL GNNNRLDEPL LIVDMSKNSL TGSLPPSLGG LKGLLKMDLS NNRLDGRIPP ELAGLESLTL LDLRNNSLTG GLPEFVLGMP
301: ALQDLLLSSN PLLGGTLMPH GWEKMASLAS LDLSNVGLAG AIPESMAAMP RLRFLALDHN RLSGAVPAKL AALPSIGAMY LNGNNLTGVL EFSARFYRRM
401: GSRFASWDNP GLCAAETAGG APTGVAVCKD AQDPPRVGVR DRVDGAGGKP EASSSLPTSS SPFGLSGRKV AGLWCLAMVM VL

Best Arabidopsis Sequence Match ( AT3G25670.1 )
(BLAST)

001: MSWIHLVLFL CLTLLCCVTG ELSPEGTDDG APMEKTEQEA LYSAIQGFVG DSWNGSDLYP DPCGWTPIQG VSCDLYGDLW YVTDLTLGLV HENSLSCATS
101: LEIKPQLFKL KHLKSLTFFN CFTSPIRIPK EDWINLASNL ESLEFRSNPG LIGELPETIG SLTKLKSLVV LENGFNGKLP TRICNLTRLK RLVLAGNLFT
201: GTIPDCFNGF KDLLILDMSR NSFSGILPLS VGEMVSLLKL DLSNNQLEGR LPQEIGFLKN LTLLDLRNNR ISGGLFENIE KIPSLTDLVL SGNPMGSDDM
301: MGIKWENMGN LVILDLSKMG LRGEVPLGLT SLRRLRFLGL NDNNLTGTVP SKELETLPCL GALYINGNNL SGELRFSRKF YEKMGTRFKA SKNPNLCQDV
401: VSESRQYVVG LKSCMMEKAE DSLVIKQTWS NLKKEDESSS SMGVMVTRHV LLSNGFMWDL LLELSLILLL NLLVC

Arabidopsis Description

Leucine-rich repeat (LRR) family protein [Source:UniProtKB/TrEMBL;Acc:F4JA38]
SUBAcon: [extracellular]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.