Factsheet for TraesCS3D01G282900.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

extracellular 5
endoplasmic reticulum 4
vacuole 4
plasma membrane 5
golgi 4
cytosol 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	cytosol, secretory
iPSORT:	secretory
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G282900.1	Wheat	extracellular, plasma membrane	94.21	93.79
HORVU3Hr1G069160.1	Barley	extracellular, plasma membrane	93.32	91.48
TraesCS3B01G316600.1	Wheat	extracellular, plasma membrane	92.2	90.39
Os01t0729400-01	Rice	plasma membrane, vacuole	78.17	77.31
Zm00001d011757_P001	Maize	extracellular, plasma membrane	72.16	72.32
EES01405	Sorghum	extracellular, plasma membrane	75.28	71.31
TraesCS1D01G353700.1	Wheat	extracellular, vacuole	63.7	65.45
TraesCS5D01G384300.1	Wheat	plasma membrane	36.97	36.4
GSMUA_Achr4P15510_001	Banana	cytosol	29.84	31.68
VIT_12s0142g00620.t01	Wine grape	cytosol	29.18	30.68
Solyc10g007830.1.1	Tomato	endoplasmic reticulum, plasma membrane, vacuole	27.17	27.6
Bra004719.1-P	Field mustard	extracellular, plasma membrane, vacuole	27.84	27.53
PGSC0003DMT400054822	Potato	plasma membrane	26.95	26.59
AT2G42800.1	Thale cress	vacuole	27.17	26.41
CDY50822	Canola	extracellular, plasma membrane, vacuole	25.17	26.4
CDX79853	Canola	extracellular, plasma membrane, vacuole	24.72	25.93
TraesCS2D01G355900.1	Wheat	plasma membrane	18.49	16.94
TraesCS3D01G072300.2	Wheat	endoplasmic reticulum, plasma membrane, vacuole	16.26	15.15
TraesCS3D01G072400.2	Wheat	extracellular, plasma membrane	15.14	13.93

Protein Annotations

EnsemblPlants:TraesCS3D01G282900.1	EnsemblPlantsGene:TraesCS3D01G282900	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PANTHER:PTHR45183
PANTHER:PTHR45183:SF3	PFAM:PF13855	PRINTS:PR00019	SEG:seg	SignalP:SignalP-noTM	SMART:SM00369
SUPFAM:SSF52058	MapMan:35.1	:	:	:	:

Description

No Description!

Coordinates

chr3D:-:391246080..391247429

Molecular Weight (calculated)

47016.6 Da

IEP (calculated)

5.653

GRAVY (calculated)

0.154

Length

449 amino acids

Sequence
(BLAST)

001: MPASIAVFLC LLSVANAAAM DPAERETLFL VMDAVSSDRD WRSESPDPCG APWPGLECKP APGTAAPLHV TRLDFGVEPN PSCKDAATFP PQVLTLPRLQ
101: SLFFVDCFNN PAAVTALVLP SANLSSSTLQ QLSIRANPSL SGVMPPQLVR LRSLQVLTIS QNGLVRGEIP QGIGELKSLV HLDLSYNSLS GPVPSRISEL
201: KGLVGLDLSY NALSGPIPSR IGDLNQLQKL DLSSNNLTGG IPDTVANLTS LTFLALSNNG LNGHFPPGLS GLRNLQYLIM DNNPMDVPLP SELGSLARLQ
301: ELRLAGSGYS GPIPAAFGQL ASLTTLSLED NNLTGEIPAG LSRLHRIYHL NLSNNGLGGA VPFDGAFLRR LGRNLDLSGN SGLCLDVVRD VGVGVGACHG
401: GGGGDGSLAR DSVSSAARGV MARGSTDSFR FRLLGPVCVV VICIFLSSE

Best Arabidopsis Sequence Match ( AT2G42800.1 )
(BLAST)

001: MTMKRALPSP SSLLFFFLLI TPLFLCQENR VSASMPPSES ETLFKIMESM SSDQQWRQSH PNPCAPGSSW PGIECKTGPD HLSHVSRLDF GSAPNPSCKS
101: SASFPSSIFT LPFLQSVFFF NCFTHFPTTI MFPIKLIPNS SLQQLSLRSN PSLSGQIPPR ISSLKSLQIL TLSQNRLTGD IPPAIFSLKS LVHLDLSYNK
201: LTGKIPLQLG NLNNLVGLDL SYNSLTGTIP PTISQLGMLQ KLDLSSNSLF GRIPEGVEKL RSLSFMALSN NKLKGAFPKG ISNLQSLQYF IMDNNPMFVA
301: LPVELGFLPK LQELQLENSG YSGVIPESYT KLTNLSSLSL ANNRLTGEIP SGFESLPHVF HLNLSRNLLI GVVPFDSSFL RRLGKNLDLS GNRGLCLNPE
401: DEFSVVKTGV DVCGKNVSSG GGLSVHSSKK KSQASRYYRS CFFANALFPF ALFLGLHQRW VL

Arabidopsis Description

AtRLP29RLP29 [Source:UniProtKB/TrEMBL;Acc:A0A178VT48]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.