Factsheet for HORVU3Hr1G069160.1

Subcellular Localization

min:

: max

Winner_takes_all: plasma membrane, extracellular

Predictor Summary:

extracellular 6
endoplasmic reticulum 4
vacuole 4
plasma membrane 5
golgi 4
cytosol 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	extracellular, plasma membrane
Any Predictor:	cytosol, nucleus, secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	cytosol
Plant-mPloc:	extracellular, nucleus
Predotar:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	extracellular

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS3A01G282900.1	Wheat	extracellular, plasma membrane	92.58	94.01
TraesCS3D01G282900.1	Wheat	extracellular, plasma membrane	91.48	93.32
TraesCS3B01G316600.1	Wheat	extracellular, plasma membrane	90.61	90.61
Os01t0729400-01	Rice	plasma membrane, vacuole	76.64	77.31
Zm00001d011757_P001	Maize	extracellular, plasma membrane	70.31	71.88
EES01405	Sorghum	extracellular, plasma membrane	72.93	70.46
HORVU1Hr1G081210.1	Barley	cytosol, peroxisome, plasma membrane	62.88	51.52
HORVU5Hr1G092930.2	Barley	plasma membrane	36.68	33.47
GSMUA_Achr4P15510_001	Banana	cytosol	28.82	31.21
VIT_12s0142g00620.t01	Wine grape	cytosol	28.17	30.21
Bra004719.1-P	Field mustard	extracellular, plasma membrane, vacuole	27.51	27.75
CDY50822	Canola	extracellular, plasma membrane, vacuole	25.11	26.87
AT2G42800.1	Thale cress	vacuole	27.07	26.84
Solyc10g007830.1.1	Tomato	endoplasmic reticulum, plasma membrane, vacuole	25.76	26.7
CDX79853	Canola	extracellular, plasma membrane, vacuole	24.67	26.4
PGSC0003DMT400054822	Potato	plasma membrane	26.2	26.37
HORVU1Hr1G008420.1	Barley	extracellular	5.68	19.26
HORVU2Hr1G086860.1	Barley	plasma membrane	18.56	17.24
HORVU3Hr1G013160.4	Barley	vacuole	15.28	14.4

Protein Annotations

EnsemblPlants:HORVU3Hr1G069160.1	EnsemblPlantsGene:HORVU3Hr1G069160	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PANTHER:PTHR45183
PANTHER:PTHR45183:SF3	PFAM:PF13855	PRINTS:PR00019	SEG:seg	SignalP:SignalP-noTM	SMART:SM00369
SUPFAM:SSF52058	UniParc:UPI0002962800	UniProt:M0Z3F1	MapMan:35.1	:	:

Description

No Description!

Coordinates

chrchr3H:+:524361516..524363272

Molecular Weight (calculated)

48178.9 Da

IEP (calculated)

5.383

GRAVY (calculated)

0.106

Length

458 amino acids

Sequence
(BLAST)

001: MDATMPASIA AFLCLLSVAA AMDPAERETL FLVMDAVSSD RDWRSESPDP CGAPWPGLEC KPAPGSAAPL HVTRLDFGVE PNPSCKDAAA FPPQVLTLPR
101: LQSLFFVECF NNPAAVTALV LPSANLSSST LQQLSIRANP SLSGVMPPQL VRLRSLQVLT ISQNGLVRGE IPQGIGELKS LVHLDLSYNS LSGPVPSRIS
201: ELQGLVGLDL SYNSLSGPIP SRIGDLRQLQ KLDLSSNNLT GGIPDTVANL TALTFLALSN NGLSGHFPPG LSGLRNLQYL IMDNNPMDVP LPSELGSLAR
301: LQELRLAGSG YSGPIPAAFG QLASLTTLSL EDNNLTGEIP AGLSRLHRIY HLNLSNNGLG GAVPFDGAFL RRLGRNLDLS GNSGLCLDDR DVVRDAGIGV
401: GACHGGGGRD GSLARDSVSS ATRGVMTRAS TDSFRFHLLG PVCVVVISCI FLPSNEYA

Best Arabidopsis Sequence Match ( AT2G42800.1 )
(BLAST)

001: MTMKRALPSP SSLLFFFLLI TPLFLCQENR VSASMPPSES ETLFKIMESM SSDQQWRQSH PNPCAPGSSW PGIECKTGPD HLSHVSRLDF GSAPNPSCKS
101: SASFPSSIFT LPFLQSVFFF NCFTHFPTTI MFPIKLIPNS SLQQLSLRSN PSLSGQIPPR ISSLKSLQIL TLSQNRLTGD IPPAIFSLKS LVHLDLSYNK
201: LTGKIPLQLG NLNNLVGLDL SYNSLTGTIP PTISQLGMLQ KLDLSSNSLF GRIPEGVEKL RSLSFMALSN NKLKGAFPKG ISNLQSLQYF IMDNNPMFVA
301: LPVELGFLPK LQELQLENSG YSGVIPESYT KLTNLSSLSL ANNRLTGEIP SGFESLPHVF HLNLSRNLLI GVVPFDSSFL RRLGKNLDLS GNRGLCLNPE
401: DEFSVVKTGV DVCGKNVSSG GGLSVHSSKK KSQASRYYRS CFFANALFPF ALFLGLHQRW VL

Arabidopsis Description

AtRLP29RLP29 [Source:UniProtKB/TrEMBL;Acc:A0A178VT48]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.