Factsheet for Solyc10g007830.1.1

Subcellular Localization

min:

: max

Winner_takes_all: endoplasmic reticulum, vacuole, plasma membrane

Predictor Summary:

extracellular 6
endoplasmic reticulum 6
vacuole 6
plasma membrane 6
golgi 5

Predictors

GFP

MS/MS

Papers

Winner Takes All:	endoplasmic reticulum, plasma membrane, vacuole
Any Predictor:	secretory
BaCelLo:	secretory
iPSORT:	secretory
MultiLoc:	endoplasmic reticulum
Plant-mPloc:	extracellular
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plasma membrane
YLoc:	vacuole

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400054822	Potato	plasma membrane	81.67	79.34
VIT_12s0142g00620.t01	Wine grape	cytosol	55.66	57.61
AT2G42800.1	Thale cress	vacuole	57.69	55.19
Bra004719.1-P	Field mustard	extracellular, plasma membrane, vacuole	56.11	54.63
GSMUA_Achr4P15510_001	Banana	cytosol	51.58	53.9
CDX79853	Canola	extracellular, plasma membrane, vacuole	52.04	53.74
CDY50822	Canola	extracellular, plasma membrane, vacuole	51.58	53.27
Zm00001d002194_P001	Maize	cytosol	15.84	42.42
Solyc12g042760.1.1	Tomato	plasma membrane	33.94	31.32
Solyc06g069290.2.1	Tomato	endoplasmic reticulum, extracellular, plasma membrane	31.9	30.32
Solyc05g009990.2.1	Tomato	endoplasmic reticulum, golgi, plasma membrane	31.45	29.64
Solyc09g072630.2.1	Tomato	extracellular	28.96	29.56
TraesCS1B01G365000.1	Wheat	extracellular, vacuole	26.92	27.23
TraesCS3D01G282900.1	Wheat	extracellular, plasma membrane	27.6	27.17
Zm00001d010813_P001	Maize	mitochondrion	28.51	27.1
Os01t0729400-01	Rice	plasma membrane, vacuole	27.83	27.09
EES01405	Sorghum	extracellular, plasma membrane	28.96	27.0
Os05t0530701-01	Rice	plasma membrane	28.73	26.96
Zm00001d038742_P001	Maize	mitochondrion	28.51	26.92
Zm00001d011757_P001	Maize	extracellular, plasma membrane	26.92	26.56
TraesCS1D01G353700.1	Wheat	extracellular, vacuole	26.24	26.54
TraesCS3B01G316600.1	Wheat	extracellular, plasma membrane	27.38	26.42
TraesCS3A01G282900.1	Wheat	extracellular, plasma membrane	26.92	26.39
TraesCS1A01G350800.1	Wheat	extracellular, plasma membrane	25.79	26.09
HORVU3Hr1G069160.1	Barley	extracellular, plasma membrane	26.7	25.76
EES19861	Sorghum	plastid	27.38	25.53
HORVU1Hr1G081210.1	Barley	cytosol, peroxisome, plasma membrane	26.24	20.75

Protein Annotations

EnsemblPlants:Solyc10g007830.1.1	EnsemblPlantsGene:Solyc10g007830.1	Gene3D:3.80.10.10	GO:GO:0003674	GO:GO:0005488	GO:GO:0005515
InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp	PANTHER:PTHR45183
PANTHER:PTHR45183:SF3	PFAM:PF13855	PFscan:PS51450	PRINTS:PR00019	SEG:seg	SignalP:SignalP-noTM
SMART:SM00369	SUPFAM:SSF52058	UniParc:UPI000276B5BF	UniProt:K4CXW2	MapMan:11.10.2.3.3	:

Description

No Description!

Coordinates

chr10:+:2039278..2040606

Molecular Weight (calculated)

49535.3 Da

IEP (calculated)

8.399

GRAVY (calculated)

-0.013

Length

442 amino acids

Sequence
(BLAST)

001: MYPFKLSLFF PLLLILFLST SISSNINNLT QSNMNPHELE TLYKIMESIS NDQDWRRSYP NPCQQSSSWL GIECKRNTNN TYHVTRLDFG THPNPTCKKT
101: STFPSLIFQL PNLESLFFVQ CFTHTKTTIS IQENTILQQL SIRSNPSLIG TIPPQISSLK SLQILTLSQN NLLGQIPPQI FTLNSLIHLD LSYNNLTGQI
201: PYQIGNLNNL IGLDLSYNSL TNPIPSTIGL LKSLQKLDLS SNTLTGRIPQ TIEKLQSLNF LALSNNKLSG NFPKGIHKLQ ALQYFLMDDN PMMFITLPDE
301: LSQLHKLQEL SLSSSGYSGE IPSSYSQLMN LTTLSLQNNR LTGKIPVELS RLTHMYHLNL SRNLLDGVVP FNTSFLKRLG RNLDLSGNPG LCLMMNEGVY
401: VGVNVCSNTI TMPLKNRSCE ASCGVVTSLL FLVCVFQLLF CV

Best Arabidopsis Sequence Match ( AT2G42800.1 )
(BLAST)

001: MTMKRALPSP SSLLFFFLLI TPLFLCQENR VSASMPPSES ETLFKIMESM SSDQQWRQSH PNPCAPGSSW PGIECKTGPD HLSHVSRLDF GSAPNPSCKS
101: SASFPSSIFT LPFLQSVFFF NCFTHFPTTI MFPIKLIPNS SLQQLSLRSN PSLSGQIPPR ISSLKSLQIL TLSQNRLTGD IPPAIFSLKS LVHLDLSYNK
201: LTGKIPLQLG NLNNLVGLDL SYNSLTGTIP PTISQLGMLQ KLDLSSNSLF GRIPEGVEKL RSLSFMALSN NKLKGAFPKG ISNLQSLQYF IMDNNPMFVA
301: LPVELGFLPK LQELQLENSG YSGVIPESYT KLTNLSSLSL ANNRLTGEIP SGFESLPHVF HLNLSRNLLI GVVPFDSSFL RRLGKNLDLS GNRGLCLNPE
401: DEFSVVKTGV DVCGKNVSSG GGLSVHSSKK KSQASRYYRS CFFANALFPF ALFLGLHQRW VL

Arabidopsis Description

AtRLP29RLP29 [Source:UniProtKB/TrEMBL;Acc:A0A178VT48]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.