Factsheet for Zm00001d038742_P001

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

mitochondrion 1
cytosol 1
extracellular 3
endoplasmic reticulum 3
vacuole 3
plasma membrane 3
golgi 3
plastid 2

Predictors

GFP

MS/MS

Papers

Winner Takes All:	mitochondrion
Any Predictor:	cytosol, mitochondrion, plastid, secretory
iPSORT:	mitochondrion
MultiLoc:	cytosol
Predotar:	secretory
PProwler:	secretory
TargetP:	secretory
WoLF PSORT:	plastid
YLoc:	plastid

mitochondrion: 27297264

msms PMID: 27297264 doi

D Dahal, KJ Newton, BP Mooney

Division of Biological Sciences, ‡Department of Biochemistry, and §The Charles W Gehrke Proteomics Center, University of Missouri , Columbia, Missouri 65211, United States.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
EES19861	Sorghum	plastid	83.55	82.49
Zm00001d010813_P001	Maize	mitochondrion	77.56	78.06
Zm00001d002194_P001	Maize	cytosol	26.71	75.76
TraesCS1B01G365000.1	Wheat	extracellular, vacuole	68.38	73.23
TraesCS1A01G350800.1	Wheat	extracellular, plasma membrane	65.81	70.48
Os05t0530701-01	Rice	plasma membrane	70.51	70.06
TraesCS1D01G353700.1	Wheat	extracellular, vacuole	65.38	70.02
Zm00001d011757_P001	Maize	extracellular, plasma membrane	59.4	62.05
HORVU1Hr1G081210.1	Barley	cytosol, peroxisome, plasma membrane	68.16	57.07
Zm00001d033230_P001	Maize	extracellular, vacuole	36.11	35.58
GSMUA_Achr4P15510_001	Banana	cytosol	27.35	30.26
Solyc10g007830.1.1	Tomato	endoplasmic reticulum, plasma membrane, vacuole	26.92	28.51
VIT_12s0142g00620.t01	Wine grape	cytosol	25.85	28.34
PGSC0003DMT400054822	Potato	plasma membrane	27.14	27.91
Bra004719.1-P	Field mustard	extracellular, plasma membrane, vacuole	26.5	27.31
AT2G42800.1	Thale cress	vacuole	26.71	27.06
CDX79853	Canola	extracellular, plasma membrane, vacuole	23.08	25.23
CDY50822	Canola	extracellular, plasma membrane, vacuole	22.65	24.77
Zm00001d044182_P001	Maize	vacuole	17.31	16.01
Zm00001d040130_P001	Maize	mitochondrion	17.31	15.25

Protein Annotations

Gene3D:3.80.10.10	MapMan:35.1	UniProt:A0A1D6MA74	ProteinID:AQK87694.1	GO:GO:0003674	GO:GO:0005488
GO:GO:0005515	InterPro:IPR001611	InterPro:IPR032675	InterPro:LRR_dom_sf	InterPro:Leu-rich_rpt	InterPro:Leu-rich_rpt_typical-subtyp
PFAM:PF13516	PFAM:PF13855	PRINTS:PR00019	PANTHER:PTHR45183	PANTHER:PTHR45183:SF2	SMART:SM00369
SUPFAM:SSF52058	SignalP:SignalP-noTM	UniParc:UPI0008456ABB	EnsemblPlantsGene:Zm00001d038742	EnsemblPlants:Zm00001d038742_P001	EnsemblPlants:Zm00001d038742_T001
SEG:seg	:	:	:	:	:

Description

receptor like protein 29

Coordinates

chr6:+:163657410..163658979

Molecular Weight (calculated)

48918.4 Da

IEP (calculated)

9.385

GRAVY (calculated)

0.128

Length

468 amino acids

Sequence
(BLAST)

001: MAPAPSSSRT RALPPAILYI LLSLQIAAAA AAMDPVERET LLRVMESVSS DRDWREAAGA DPCGSPWPGL ECRPGAAPGP GGGAARMHVS RLDFGVPPNP
101: TCKDTATFPA AAFALPELRA LFLVGCFKNP DAVAAFALPP ASNLSSSRLQ QLSVRANPSL SGALPPQLAS MRSLQVLTVS QNALIRGAVP NGIGALASLV
201: HLDLSYNSLT DPIPSRLGGL RRLVGLDLSY NSFSGRIPSR LGDLAQLQKL DLSSNNLTGG VPPAITRLRA LTFLALSNNG LRGRLPAGLS GLRDLQYLIM
301: ENNPMGVPLP PELGNIARLQ ELRLANSGYS GSIPDTFGLL SSLTTLSLEN NSLTGRIPAG LSRLKRMYHL NLSKNGLDGV VPFDSAFLRQ LGRNLDLSGN
401: PGLCVTDRAV VPDVGVGVCG GDVACESSAA AESSLVGRVV RREVTRGRWP AGLLRPAAVA LCSCGLLL

Best Arabidopsis Sequence Match ( AT2G42800.1 )
(BLAST)

001: MTMKRALPSP SSLLFFFLLI TPLFLCQENR VSASMPPSES ETLFKIMESM SSDQQWRQSH PNPCAPGSSW PGIECKTGPD HLSHVSRLDF GSAPNPSCKS
101: SASFPSSIFT LPFLQSVFFF NCFTHFPTTI MFPIKLIPNS SLQQLSLRSN PSLSGQIPPR ISSLKSLQIL TLSQNRLTGD IPPAIFSLKS LVHLDLSYNK
201: LTGKIPLQLG NLNNLVGLDL SYNSLTGTIP PTISQLGMLQ KLDLSSNSLF GRIPEGVEKL RSLSFMALSN NKLKGAFPKG ISNLQSLQYF IMDNNPMFVA
301: LPVELGFLPK LQELQLENSG YSGVIPESYT KLTNLSSLSL ANNRLTGEIP SGFESLPHVF HLNLSRNLLI GVVPFDSSFL RRLGKNLDLS GNRGLCLNPE
401: DEFSVVKTGV DVCGKNVSSG GGLSVHSSKK KSQASRYYRS CFFANALFPF ALFLGLHQRW VL

Arabidopsis Description

AtRLP29RLP29 [Source:UniProtKB/TrEMBL;Acc:A0A178VT48]
SUBAcon: [vacuole]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.