CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 3
plastid 2
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDY24491	Canola	cytosol	11.73	59.38
KRG99350	Soybean	cytosol	55.86	43.83
KRH45653	Soybean	cytosol	53.09	40.09
KRH03287	Soybean	cytosol	94.75	34.04
KRH19967	Soybean	cytosol	83.64	29.46
KRH54393	Soybean	cytosol	82.72	29.39
Solyc03g112910.2.1	Tomato	cytosol, plastid	79.32	28.52
PGSC0003DMT400046738	Potato	cytosol	79.32	28.52
VIT_17s0000g08520.t01	Wine grape	cytosol	80.86	28.45
AT4G32180.1	Thale cress	cytosol	78.4	28.19
CDY61390	Canola	cytosol	77.47	27.92
Bra040069.1-P	Field mustard	cytosol	77.47	27.92
CDX68824	Canola	cytosol	77.47	27.7
CDX75226	Canola	cytosol	77.78	27.69
Bra011327.1-P	Field mustard	cytosol	77.78	27.69
KRH38729	Soybean	cytosol, nucleus	9.26	8.17
HORVU3Hr1G078450.1	Barley	cytosol	2.16	7.95
KRG92458	Soybean	plastid	8.64	7.69
KRH30808	Soybean	mitochondrion	6.48	6.34
KRG92457	Soybean	plastid	7.72	5.9
KRH33424	Soybean	cytosol	1.54	4.72
KRH55310	Soybean	cytosol	6.48	4.08
KRH34342	Soybean	cytosol	1.54	2.53
GSMUA_Achr6P09100_001	Banana	golgi	4.01	2.5
KRG90159	Soybean	cytosol	0.93	1.6

Protein Annotations

KEGG:00770+2.7.1.33	Gene3D:1.10.8.780	Gene3D:3.30.420.40	Gene3D:3.30.420.510	MapMan:7.4.2	EMBL:ACUP02002812
EnsemblPlantsGene:GLYMA_05G037900	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004594	GO:GO:0005488
GO:GO:0005524	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0015937	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	UniProt:K7KMQ8	EnsemblPlants:KRH57072
ProteinID:KRH57072	ProteinID:KRH57072.1	PFAM:PF03630	PANTHER:PTHR12280	PANTHER:PTHR12280:SF34	MetaCyc:PWY-3961
SUPFAM:SSF53067	TIGRFAMs:TIGR00555	InterPro:Type_II_PanK	UniParc:UPI0002959444	:	:

Description

hypothetical protein

Coordinates

chr5:-:3368133..3371154

Molecular Weight (calculated)

35950.6 Da

IEP (calculated)

6.720

GRAVY (calculated)

-0.432

Length

324 amino acids

Sequence
(BLAST)

001: MHRSSSRPQL DLSKAEIQGN FEEKYPTILL PNQSHDISHL ALDIGGSLIK LVYFSRHRDQ STYDKRMINV NNRLGFPPNG NRRSYPILGG RLHFVKFETS
101: KINECLDFIN SKQLHCGGES RYSDATTDSN AIIKATGGGA HKFADLFKER LGLSLDKEDE MNCLVAGANF LLKAIRREAF THMEGQKEFV QIDTNDLFPY
201: LLVNIGSGVS MIKVDGDGKY ERVNGTNVGG GTYWGLGRLL TKCESSNFDE LLELSQKGDN SNTDMLVGDI YGGMDYSKTG LSASTIASSF GKVTSEKKGL
301: DDYRPEDISL SLLRMISYNI AQVS

Best Arabidopsis Sequence Match ( AT1G60440.1 )
(BLAST)

001: MDPTQISHLA LDIGGTLIKL VYFSANGDYS EESRNGCSVV KGRLCFAKFE TRKIDDCLEF IRFNILHHSG VQQPNGEGHD KLYVKATGGG AFKFADLFKE
101: KLGILFDKED EMCSLVGGVN FLLKTVPREA FTYLDGQKKF VEIDHNDLYP YLLVNIGSGV SMIKVDGDGK YERISGTSLG GGTFLGLGKL LTKCKSFDEL
201: LELSHHGNNR VIDMLVGDIY GGTDYSKIGL SSTAIASSFG KAISDGKELE DYQPEDVARS LLRMISNNIG QIAYLNALRF GLKRIFFGGF FIRGLEYTMD
301: TISVAVHFWS RGEAKAMFLR HEGFLGALGA FTSYNDQSHN DLKPHHHTVQ RAILNCSGHN FRHIPVTSNL NESETIECSI NLV

Arabidopsis Description

PANK1Pantothenate kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:O80765]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.