CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra040069.1-P	Field mustard	cytosol	100.0	100.0
CDX68824	Canola	cytosol	95.55	94.81
CDX75226	Canola	cytosol	95.88	94.73
PGSC0003DMT400046738	Potato	cytosol	82.87	82.69
Solyc03g112910.2.1	Tomato	cytosol, plastid	82.65	82.46
KRH54393	Soybean	cytosol	83.2	82.02
VIT_17s0000g08520.t01	Wine grape	cytosol	83.43	81.43
KRH19967	Soybean	cytosol	82.31	80.43
KRH03287	Soybean	cytosol	80.53	80.27
KRH57072	Soybean	cytosol	27.92	77.47
CDY24491	Canola	cytosol	5.34	75.0
GSMUA_Achr6P09100_001	Banana	golgi	41.27	71.48
CDY40427	Canola	cytosol	20.02	60.4
HORVU3Hr1G078450.1	Barley	cytosol	5.9	60.23
CDY53055	Canola	cytosol	29.14	45.02
CDY47225	Canola	cytosol	28.7	44.41
CDX87995	Canola	cytosol	12.68	31.58
CDY07861	Canola	cytosol	12.46	30.85
CDX75497	Canola	cytosol	12.46	30.52
CDX69133	Canola	cytosol	12.35	30.25

Protein Annotations

KEGG:00770+2.7.1.33	Gene3D:1.10.8.780	Gene3D:1.20.1700.10	Gene3D:3.30.420.40	Gene3D:3.30.420.510	MapMan:7.4.2
GO:A0A078JBG2	UniProt:A0A078JBG2	InterPro:AF1104-like_sf	InterPro:At2g17340_3_helix_bundle	EnsemblPlants:CDY61390	ProteinID:CDY61390
ProteinID:CDY61390.1	InterPro:DUF89	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004594
GO:GO:0005488	GO:GO:0005524	GO:GO:0005575	GO:GO:0005622	GO:GO:0005623	GO:GO:0005737
GO:GO:0005829	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987
GO:GO:0015937	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	EnsemblPlantsGene:GSBRNA2T00033773001	InterPro:IPR035073
PFAM:PF01937	PFAM:PF03630	PIRSF:PIRSF036939	PANTHER:PTHR12280	PANTHER:PTHR12280:SF34	MetaCyc:PWY-3961
InterPro:PanK_long	SUPFAM:SSF111321	SUPFAM:SSF53067	TIGRFAMs:TIGR00555	InterPro:Type_II_PanK	UniPathway:UPA00241
UniParc:UPI0002546B33	SEG:seg	:	:	:	:

Description

BnaA08g30620DBnaA08g30620D protein [Source:UniProtKB/TrEMBL;Acc:A0A078JBG2]

Coordinates

chrLK033992:-:13619..19410

Molecular Weight (calculated)

99589.3 Da

IEP (calculated)

5.636

GRAVY (calculated)

-0.277

Length

899 amino acids

Sequence
(BLAST)

001: MAGREDDEHD PPILDDKTEA EAKSSERDMA PQGPGTSIHR SGSRPQLDLS KAEIQGNFEE RDPTILLPNQ SDDISHLALD IGGSLIKLLY FSRHEDYSND
101: DDKRKKTIKE RLGLTNGKLR SYPVLGGRLH FVKFETHKIN ECLDFIHSKQ LHRRDPYPWS SKTLPLGTGV IKVTGGGAYK FADLFKERLG VSIEKEDEMH
201: CLVSGANFLL KAIRHEAYTH MEGEKEFVQI EPNDLYPYLL VNVGSGVSII KVDGEGKFER VSGTNVGGGT YWGLGRLLTK CKSFDELLEL SQKGDNSTID
301: MLVGDIYGGM DYSKIGLSAS TIASSFGKAI SENKELEDYR PEDISLSLLR MISYNIGQIS YLNALRFGLK RIFFGGFFIR GHAYTMDTIS FAVHFWSKGD
401: MQAMFLRHEG FLGAMGAFMS YEKHGLDDLM SHQLVERFPM GAPYTGGNIH GPPLGDLNEK ISWMEKFVRR GTEITAPVPM TPSKTTGLGG FDVPSSRGSA
501: LRSDASALNV GVLHLVPTLE VFPLLADPKM YEPNTIDLSD QGEREYWLKV LSEHLPDLVD TAVASEGGTE DAKRRGDAFA RAFSAHLARL MEEPAAYGKL
601: GLANLLELRE ECLREFQFVD AYRSIKQREN EASLAVLPDL LEELDSMTEE ARLLTLIEGV LAANIFDWGS RACVDLYHKG TIIEIYRMSR NKMQRPWRVD
701: DFDAFKERML GSGGKQPHRH KRALLFVDNS GADVILGMLP LAREFLRRGT EVVLVANSLP ALNDVTAMEL PDIVAGAAKH CDILRRAAEM GGLLVDAMVN
801: PGDGSKNDLT SAPLMVVENG CGSPCIDLRQ VSSELAAAAK DADLVVLEGM GRALHTNFNA QFKCEALKLA MVKNQRLAEK LINGNIYDSV CRYEPPSLS

Best Arabidopsis Sequence Match ( AT4G32180.1 )
(BLAST)

001: MAGQEDEYDP ILDNKREAEA KSQVSVAADK NMAPSTSGTP IHRSGSRPQL DLSKAEIQGN LEERDPTILL PNQSDDISHL ALDIGGSLIK LLYFSRHEDY
101: SNDDDKRKRT IKERLGITNG NLRSYPVLGG RLHFVKFETH KINECLDFIH SKQLHRRDPY PWSSKTLPLG TGVIKVTGGG AFKFADLFKE RLGVSIEKED
201: EMHCLVSGAN FLLKAIRHEA FTHMEGEKEF VQIDPNDLYP YLLVNVGSGV SIIKVDGEGK FERVSGTNVG GGTYWGLGRL LTKCKSFDEL LELSQKGDNS
301: AIDMLVGDIY GGMDYSKIGL SASTIASSFG KAISENKELD DYRPEDISLS LLRMISYNIG QISYLNALRF GLKRIFFGGF FIRGHAYTMD TISFAVHFWS
401: KGEMQAMFLR HEGFLGALGA FMSYEKHGLD DLMSHQLVER FPMGAPYTGG NIHGPPLGDL DEKISWMEKF VRRGTEITAP VPMTPSKTTG LGGFEVPSSR
501: GSALRSDASA LNVGVLHLVP TLEVFPLLAD PKTYEPNTID LSDQGEREYW LKVLSEHLPD LVDTAVASEG GTEDAKRRGD AFARAFSAHL ARLMEEPAAY
601: GKLGLANLLE LREECLREFQ FVDAYRSIKQ RENEASLAVL PDLLEELDSM SEEARLLTLI EGVLAANIFD WGSRACVDLY HKGTIIEIYR MSRNKMQRPW
701: RVDDFDAFKE RMLGSGGKQP HRHKRALLFV DNSGADVILG MLPLAREFLR RGTEVVLVAN SLPALNDVTA MELPDIVAGA AKHCDILRRA AEMGGLLVDA
801: MVNPGDGSKK DSTSAPLMVV ENGCGSPCID LRQVSSELAA AAKDADLVVL EGMGRALHTN FNAQFQCEAL KLAMVKNQRL AEKLIKGNIY DCVCRYEPPS
901: L

Arabidopsis Description

PANK2PANK2 [Source:UniProtKB/TrEMBL;Acc:A0A178V4D0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.