CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 2

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRH57072	Soybean	cytosol	34.04	94.75
KRH54393	Soybean	cytosol	86.25	85.31
KRH19967	Soybean	cytosol	85.7	84.02
Solyc03g112910.2.1	Tomato	cytosol, plastid	81.04	81.13
PGSC0003DMT400046738	Potato	cytosol	81.04	81.13
VIT_17s0000g08520.t01	Wine grape	cytosol	82.82	81.11
AT4G32180.1	Thale cress	cytosol	80.71	80.8
Bra040069.1-P	Field mustard	cytosol	80.27	80.53
CDY61390	Canola	cytosol	80.27	80.53
CDX68824	Canola	cytosol	80.04	79.69
Bra011327.1-P	Field mustard	cytosol	80.38	79.67
CDX75226	Canola	cytosol	80.27	79.56
GSMUA_Achr6P09100_001	Banana	golgi	41.8	72.64
CDY24491	Canola	cytosol	4.55	64.06
HORVU3Hr1G078450.1	Barley	cytosol	6.21	63.64
KRG99350	Soybean	cytosol	26.94	58.84
KRH45653	Soybean	cytosol	25.39	53.38
KRH34342	Soybean	cytosol	9.2	41.92
KRH38729	Soybean	cytosol, nucleus	12.53	30.79
KRG92458	Soybean	plastid	12.42	30.77
KRH55310	Soybean	cytosol	16.41	28.74
KRG92457	Soybean	plastid	11.97	25.47
KRH30808	Soybean	mitochondrion	8.54	23.26
KRH33424	Soybean	cytosol	2.66	22.64
KRG90159	Soybean	cytosol	3.55	17.02

Protein Annotations

KEGG:00770+2.7.1.33	Gene3D:1.10.8.780	Gene3D:1.20.1700.10	EntrezGene:100783082	Gene3D:3.30.420.40	Gene3D:3.30.420.510
MapMan:7.4.2	EMBL:ACUP02010342	InterPro:AF1104-like_sf	InterPro:At2g17340_3_helix_bundle	InterPro:DUF89	EnsemblPlantsGene:GLYMA_17G089200
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004594	GO:GO:0005488	GO:GO:0005524
GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0015937
GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	UniProt:I1MTH1	InterPro:IPR035073	EnsemblPlants:KRH03287
ProteinID:KRH03287	ProteinID:KRH03287.1	PFAM:PF01937	PFAM:PF03630	PIRSF:PIRSF036939	PANTHER:PTHR12280
PANTHER:PTHR12280:SF34	MetaCyc:PWY-3961	InterPro:PanK_long	SUPFAM:SSF111321	SUPFAM:SSF53067	TIGRFAMs:TIGR00555
InterPro:Type_II_PanK	UniParc:UPI0002968B27	SEG:seg	:	:	:

Description

hypothetical protein

Coordinates

chr17:+:6926459..6938139

Molecular Weight (calculated)

100102.0 Da

IEP (calculated)

6.420

GRAVY (calculated)

-0.186

Length

902 amino acids

Sequence
(BLAST)

001: MNFLLQKEGL VNFISLLDLR LKLETLRLRE REMAHTGSNS SMHRSSSRPQ LDLSKAEIQG NFEEKYPTIL LPNQSHDISH LALDIGGSLI KLVYFSRHQD
101: QSTYDKRVKN VKNRLGFPPN GNRRSYPILG GRLHFVKFET SKINECLDFI SSKQLHSAGG GESRYSDART DSNAIIKATG GGAHKFADLF KERLGLSLDK
201: EDEMSCLVAG ANFLLKAIRH EAFTHMEGQK EFVQIDTNDL FPYLLVNIGS GVSMIKVDGD GKYERVSGTN VGGGTYWGLG RLLTKCESFD ELLELSQKGD
301: NSNTDMLVGD IYGGMDYSKI GLSASTIASS FGKATSEKKG LEDYRPEDIS LSLLRMISYN IAQIAYLNAL RFGLKRIFFG GFFIRGHAYT MDAISFAIHF
401: WSNGAAQAMF LRHEGFLGAL GAFMSYEKHG LDDLMVHQLV ERFPMGAPYT GGKIHGPPLR DLNEKISWME KFLQKVTEIT APVPMAPPGT TGLGGFEVPL
501: SKGSTLRSDA SALNVGVLHL VPTLEVFPLL ADLKMYEPNT IDLSDHSELE YWFKILSEHL PDLVDKAVAS EGGTDDAKRR GDAFARAFSA HLARLMEEPA
601: AYGKLGLARL LEMREECLRE FHFFDAYISI KQRENEASLA VLPDLLMELD SMDEETRLLT LIEGVLAANI FDWGSRACVD LYHKGTIIEI YRMSRNKMQR
701: PWRVDDFDAF KQRMLGTGDK KPPPHRRALL FVDNAGADIV LGMLPLAREL LRRGTEVVLV ANSLPALNDV TAMELPDIVA EAAKHCDILR RAAESGGLLV
801: DAMTNTLDSP RENSSSVPLM VVENGCGSPC IDLRQVSSEL AAAAKDADLI ILEGMGRALH TNLNARFQCD ALKLAMVKNQ RLAEKLIKGN IYDCICKYEP
901: AN

Best Arabidopsis Sequence Match ( AT1G60440.1 )
(BLAST)

001: MDPTQISHLA LDIGGTLIKL VYFSANGDYS EESRNGCSVV KGRLCFAKFE TRKIDDCLEF IRFNILHHSG VQQPNGEGHD KLYVKATGGG AFKFADLFKE
101: KLGILFDKED EMCSLVGGVN FLLKTVPREA FTYLDGQKKF VEIDHNDLYP YLLVNIGSGV SMIKVDGDGK YERISGTSLG GGTFLGLGKL LTKCKSFDEL
201: LELSHHGNNR VIDMLVGDIY GGTDYSKIGL SSTAIASSFG KAISDGKELE DYQPEDVARS LLRMISNNIG QIAYLNALRF GLKRIFFGGF FIRGLEYTMD
301: TISVAVHFWS RGEAKAMFLR HEGFLGALGA FTSYNDQSHN DLKPHHHTVQ RAILNCSGHN FRHIPVTSNL NESETIECSI NLV

Arabidopsis Description

PANK1Pantothenate kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:O80765]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.