Factsheet for VIT_17s0000g08520.t01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol, plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400046738	Potato	cytosol	85.67	87.57
Solyc03g112910.2.1	Tomato	cytosol, plastid	85.45	87.35
KRH54393	Soybean	cytosol	82.95	83.77
Bra040069.1-P	Field mustard	cytosol	81.43	83.43
CDY61390	Canola	cytosol	81.43	83.43
CDX68824	Canola	cytosol	81.65	83.0
KRH03287	Soybean	cytosol	81.11	82.82
AT4G32180.1	Thale cress	cytosol	81.0	82.8
Bra011327.1-P	Field mustard	cytosol	81.54	82.53
CDX75226	Canola	cytosol	81.54	82.53
KRH19967	Soybean	cytosol	82.3	82.39
KRH57072	Soybean	cytosol	28.45	80.86
GSMUA_Achr6P09100_001	Banana	golgi	41.8	74.18
CDY24491	Canola	cytosol	4.67	67.19
VIT_01s0127g00490.t01	Wine grape	cytosol	27.69	60.86
HORVU3Hr1G078450.1	Barley	cytosol	5.75	60.23
VIT_03s0038g04010.t01	Wine grape	cytosol	11.94	29.97

Protein Annotations

KEGG:00770+2.7.1.33	Gene3D:1.10.8.780	Gene3D:1.20.1700.10	EntrezGene:100255260	wikigene:100255260	Gene3D:3.30.420.40
Gene3D:3.30.420.510	MapMan:7.4.2	InterPro:AF1104-like_sf	InterPro:At2g17340_3_helix_bundle	ProteinID:CCB42974	ProteinID:CCB42974.1
InterPro:DUF89	UniProt:F6GSM7	EMBL:FN594950	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004594	GO:GO:0005488	GO:GO:0005524	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0015937	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740
InterPro:IPR035073	EntrezGene:LOC100255260	wikigene:LOC100255260	PFAM:PF01937	PFAM:PF03630	PIRSF:PIRSF036939
PANTHER:PTHR12280	PANTHER:PTHR12280:SF34	InterPro:PanK_long	SUPFAM:SSF111321	SUPFAM:SSF53067	TIGR:TC66239
TIGRFAMs:TIGR00555	InterPro:Type_II_PanK	UniParc:UPI0002108648	ArrayExpress:VIT_17s0000g08520	EnsemblPlantsGene:VIT_17s0000g08520	EnsemblPlants:VIT_17s0000g08520.t01
RefSeq:XP_002279079	RefSeq:XP_002279079.1	SEG:seg	:	:	:

Description

Pantothenate kinase 2 [Source:UniProtKB/TrEMBL;Acc:F6GSM7]

Coordinates

chr17:-:9731669..9759393

Molecular Weight (calculated)

102130.0 Da

IEP (calculated)

5.368

GRAVY (calculated)

-0.190

Length

921 amino acids

Sequence
(BLAST)

001: MACLKEDPIL RSNDIKEDSE ETEPKDKVRE EGGVREMVLP AGNSIHRSGS RPQLDLSGAA IQGNNFEERH PTILLPNQSD DISHLALDIG GSLIKLVYFS
101: RHEDRSIDDK RKRSIKERLG VTNGNRRSYP ILGGRLHFVK FETSKINECL DFINSKQLHR GGMDSRLWLS EAPPSDDVII KATGGGAHKF ADLFKERLGV
201: SIDKEDEMDC LVAGANFLLK AIRHEAFTHM EGHKEFVQID HNDLFPYLLV NIGSGVSMIK VDGDGKFQRV SGTNVGGGTY WGLGRLLTKC KSFDDLLELS
301: QRGDNRTIDM LVGDIYGGMD YSKIGLSAST IASSFGKTIS ENKELEDYRP EDISLSLLRM ISYNIGQISY LNALRFGLKR IFFGGFFIRG HAYTMDTISF
401: AVQFWSNGDA QAMFLRHEGF LGALGAFMSY EKHGLDDLMV HQLVERFPMG APYIGGRIHG PPLGDLNEKA MVQVVGLDFL VFSDISWMEK FVQKGTEITA
501: PVPMAPSGTT GLGGFEVPSS KGDTLRSDAS ALNIGVLHLV PTLEVFPLLA DPKMYEPNTI DLADPSELEY WFTVLSEHLP DLVDKAVASE GGTDDAKRRG
601: DAFARAFSAH LARLMEEPAA YGKLGLANLL ELREECLREF HFVDAYRSIK QRENEASLAV LPDLLMEIDS MNEETRLLTL IEGVLAANIF DWGSRACVDL
701: YHKGTIIEIY RMSRKKMQRP WRVDDFDIFE ERMLGSEDKK PRPHKRALLF VDNSGADVIL GMLPLARELL RRGTEVVLVA NSLPALNDVT AMELPDIVAE
801: AAKHCDILRR AAEAGGLLVD AMVNIQDGSK DSLSSVPLMV VENGCGSPCI DLRQVSSELA AAAKEADLII LEGMGRALHT NFNARFKCDA LKLAMVKNQR
901: LAEKLIKGNI YDCVCRYEPA P

Best Arabidopsis Sequence Match ( AT4G32180.1 )
(BLAST)

001: MAGQEDEYDP ILDNKREAEA KSQVSVAADK NMAPSTSGTP IHRSGSRPQL DLSKAEIQGN LEERDPTILL PNQSDDISHL ALDIGGSLIK LLYFSRHEDY
101: SNDDDKRKRT IKERLGITNG NLRSYPVLGG RLHFVKFETH KINECLDFIH SKQLHRRDPY PWSSKTLPLG TGVIKVTGGG AFKFADLFKE RLGVSIEKED
201: EMHCLVSGAN FLLKAIRHEA FTHMEGEKEF VQIDPNDLYP YLLVNVGSGV SIIKVDGEGK FERVSGTNVG GGTYWGLGRL LTKCKSFDEL LELSQKGDNS
301: AIDMLVGDIY GGMDYSKIGL SASTIASSFG KAISENKELD DYRPEDISLS LLRMISYNIG QISYLNALRF GLKRIFFGGF FIRGHAYTMD TISFAVHFWS
401: KGEMQAMFLR HEGFLGALGA FMSYEKHGLD DLMSHQLVER FPMGAPYTGG NIHGPPLGDL DEKISWMEKF VRRGTEITAP VPMTPSKTTG LGGFEVPSSR
501: GSALRSDASA LNVGVLHLVP TLEVFPLLAD PKTYEPNTID LSDQGEREYW LKVLSEHLPD LVDTAVASEG GTEDAKRRGD AFARAFSAHL ARLMEEPAAY
601: GKLGLANLLE LREECLREFQ FVDAYRSIKQ RENEASLAVL PDLLEELDSM SEEARLLTLI EGVLAANIFD WGSRACVDLY HKGTIIEIYR MSRNKMQRPW
701: RVDDFDAFKE RMLGSGGKQP HRHKRALLFV DNSGADVILG MLPLAREFLR RGTEVVLVAN SLPALNDVTA MELPDIVAGA AKHCDILRRA AEMGGLLVDA
801: MVNPGDGSKK DSTSAPLMVV ENGCGSPCID LRQVSSELAA AAKDADLVVL EGMGRALHTN FNAQFQCEAL KLAMVKNQRL AEKLIKGNIY DCVCRYEPPS
901: L

Arabidopsis Description

PANK2PANK2 [Source:UniProtKB/TrEMBL;Acc:A0A178V4D0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.