Factsheet for Solyc03g112910.2.1

Subcellular Localization

min:

: max

Winner_takes_all: plastid, cytosol

Predictor Summary:

cytosol 5
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol, plastid
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	cytosol, plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

plastid: 22908117

msms PMID: 22908117 doi

C Barsan, M Zouine, E Maza, W Bian, I Egea, M Rossignol, D Bouyssie, C Pichereaux, E Purgatto, M Bouzayen, A Latché, JC Pech

Université de Toulouse, Institut National Polytechnique-Ecole Nationale Supérieure Agronomique de Toulouse, Génomique et Biotechnologie des Fruits, Castanet-Tolosan F-31326, France.

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400046738	Potato	cytosol	99.0	99.0
VIT_17s0000g08520.t01	Wine grape	cytosol	87.35	85.45
Bra040069.1-P	Field mustard	cytosol	82.46	82.65
CDY61390	Canola	cytosol	82.46	82.65
AT4G32180.1	Thale cress	cytosol	82.13	82.13
KRH54393	Soybean	cytosol	83.02	82.02
CDX68824	Canola	cytosol	82.35	81.9
CDX75226	Canola	cytosol	82.46	81.65
Bra011327.1-P	Field mustard	cytosol	82.35	81.54
KRH03287	Soybean	cytosol	81.13	81.04
KRH19967	Soybean	cytosol	82.57	80.87
KRH57072	Soybean	cytosol	28.52	79.32
GSMUA_Achr6P09100_001	Banana	golgi	42.06	73.03
CDY24491	Canola	cytosol	4.99	70.31
HORVU3Hr1G078450.1	Barley	cytosol	6.1	62.5
Solyc05g005250.2.1	Tomato	cytosol	26.42	55.87
Solyc10g074590.1.1	Tomato	cytosol	12.43	30.52
Solyc01g112270.1.1	Tomato	cytosol	3.33	19.74

Protein Annotations

KEGG:00770+2.7.1.33	Gene3D:1.10.8.780	Gene3D:1.20.1700.10	Gene3D:3.30.420.40	Gene3D:3.30.420.510	MapMan:7.4.2
InterPro:AF1104-like_sf	InterPro:At2g17340_3_helix_bundle	InterPro:DUF89	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004594	GO:GO:0005488	GO:GO:0005524	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0015937	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740
InterPro:IPR035073	UniProt:K4BKE4	PFAM:PF01937	PFAM:PF03630	PIRSF:PIRSF036939	PANTHER:PTHR12280
PANTHER:PTHR12280:SF34	InterPro:PanK_long	SUPFAM:SSF111321	SUPFAM:SSF53067	EnsemblPlantsGene:Solyc03g112910.2	EnsemblPlants:Solyc03g112910.2.1
TIGRFAMs:TIGR00555	InterPro:Type_II_PanK	UniParc:UPI0002767864	SEG:seg	:	:

Description

Pantothenate kinase 2 [Source:Projected from Arabidopsis thaliana (AT4G32180) UniProtKB/Swiss-Prot;Acc:Q8L5Y9]

Coordinates

chr3:+:63189344..63204073

Molecular Weight (calculated)

99462.5 Da

IEP (calculated)

5.996

GRAVY (calculated)

-0.195

Length

901 amino acids

Sequence
(BLAST)

001: MASSTTKDHS HIEIDGINEE SQQMTEKDIV EKDMAPLPGS SIHRSSSRPQ LDVSGAAIQG NFEEKDPAIL LPNQTDDISH LALDIGGSLI KLIYFSRHAD
101: RQVDDGRKRK VKERLGVTNG SRRSYPILGG RLHFVKFETS KINECLDFIH SKQLHCGGMD PRCWPSDAPP SENAVIKATG GGAYKFADLF KERLGVSIEK
201: EDEMNCLVSG ANFLLKAIRH EAFTHMEGHK EFVQIDQNDL FPYLLVNIGS GVSMIKVDGD GQFQRVSGTN VGGGTYWGLG RLLTKCKSFD ELLELSQRGD
301: NSTIDMLVGD IYGGMDYSKI GLSASTIASS FGKTISENKD LKDYKPEDIS LSLLRMISYN IGQIAYLNAL RFGLKRIFFG GFFIRGHAYT MDTISFAVQF
401: WSKGDAQAMF LRHEGFLGAL GAFMSYEKHG LDDLMVHHLV ERFPMGAPYI GGNIHGPPLG DLNEKISWME KFVRKGTEIT APVPMAPPAT TGLGGFEVPS
501: SKGVLRSDAS KLNVGVLHLV PSLEVFPLLA DPKTYEPNTI DLSDHGELEY WFTVLSEHLS DLVDKAVASE GGTDDAKRRG DAFARAFSAH LARLMEEPAA
601: YGKLGLANLL ELREECLREF HFFDAYRTIK QRENEASLAV LPDLLMELDS LTEDMRLLTL IEGVLAANIF DWGSRACVDL YHKGTIIEIY RMSRKKMQRP
701: WRVDDFDAFK ERMLGFGDKK PQPHKRALLF VDNSGADIVL GMLPLARELL RRGTEVVLVA NSLPALNDVT AMELPDIVAE AAKHCDILRG AAEAGGLLVD
801: AMSNIQDGYK ENTPSVPLMV VENGCGSPCI DLRQVSSELA AAAKDADLVI LEGMGRSLHT NYNAKFKCDA LKLAMVKNQR LAAKLVKGNI YDCVCRYEPA
901: S

Best Arabidopsis Sequence Match ( AT4G32180.1 )
(BLAST)

001: MAGQEDEYDP ILDNKREAEA KSQVSVAADK NMAPSTSGTP IHRSGSRPQL DLSKAEIQGN LEERDPTILL PNQSDDISHL ALDIGGSLIK LLYFSRHEDY
101: SNDDDKRKRT IKERLGITNG NLRSYPVLGG RLHFVKFETH KINECLDFIH SKQLHRRDPY PWSSKTLPLG TGVIKVTGGG AFKFADLFKE RLGVSIEKED
201: EMHCLVSGAN FLLKAIRHEA FTHMEGEKEF VQIDPNDLYP YLLVNVGSGV SIIKVDGEGK FERVSGTNVG GGTYWGLGRL LTKCKSFDEL LELSQKGDNS
301: AIDMLVGDIY GGMDYSKIGL SASTIASSFG KAISENKELD DYRPEDISLS LLRMISYNIG QISYLNALRF GLKRIFFGGF FIRGHAYTMD TISFAVHFWS
401: KGEMQAMFLR HEGFLGALGA FMSYEKHGLD DLMSHQLVER FPMGAPYTGG NIHGPPLGDL DEKISWMEKF VRRGTEITAP VPMTPSKTTG LGGFEVPSSR
501: GSALRSDASA LNVGVLHLVP TLEVFPLLAD PKTYEPNTID LSDQGEREYW LKVLSEHLPD LVDTAVASEG GTEDAKRRGD AFARAFSAHL ARLMEEPAAY
601: GKLGLANLLE LREECLREFQ FVDAYRSIKQ RENEASLAVL PDLLEELDSM SEEARLLTLI EGVLAANIFD WGSRACVDLY HKGTIIEIYR MSRNKMQRPW
701: RVDDFDAFKE RMLGSGGKQP HRHKRALLFV DNSGADVILG MLPLAREFLR RGTEVVLVAN SLPALNDVTA MELPDIVAGA AKHCDILRRA AEMGGLLVDA
801: MVNPGDGSKK DSTSAPLMVV ENGCGSPCID LRQVSSELAA AAKDADLVVL EGMGRALHTN FNAQFQCEAL KLAMVKNQRL AEKLIKGNIY DCVCRYEPPS
901: L

Arabidopsis Description

PANK2PANK2 [Source:UniProtKB/TrEMBL;Acc:A0A178V4D0]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.