Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- nucleus 1
- extracellular 1
- endoplasmic reticulum 1
- vacuole 1
- plasma membrane 1
- golgi 1
- plastid 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| PGSC0003DMT400038080 | Potato | cytosol | 66.45 | 27.75 |
| Solyc10g074590.1.1 | Tomato | cytosol | 59.21 | 24.52 |
| VIT_03s0038g04010.t01 | Wine grape | cytosol | 57.24 | 23.71 |
| KRH38729 | Soybean | cytosol, nucleus | 55.92 | 23.16 |
| Os06t0325500-01 | Rice | extracellular, plasma membrane | 53.29 | 22.19 |
| GSMUA_Achr9P12370_001 | Banana | cytosol | 53.29 | 22.01 |
| EER88334 | Sorghum | cytosol, plastid | 51.32 | 21.37 |
| TraesCS7A01G226400.1 | Wheat | cytosol, plastid | 51.32 | 21.37 |
| TraesCS7B01G193200.1 | Wheat | cytosol, plastid | 51.32 | 21.37 |
| TraesCS7D01G228000.1 | Wheat | golgi, unclear | 51.32 | 21.37 |
| Zm00001d045911_P002 | Maize | cytosol, plastid | 51.32 | 18.98 |
| HORVU3Hr1G078460.1 | Barley | mitochondrion | 13.16 | 14.18 |
| Solyc05g005250.2.1 | Tomato | cytosol | 15.79 | 5.63 |
| Solyc03g112910.2.1 | Tomato | cytosol, plastid | 19.74 | 3.33 |
Protein Annotations
| EnsemblPlants:Solyc01g112270.1.1 | EnsemblPlantsGene:Solyc01g112270.1 | InterPro:AF1104-like_sf | InterPro:DUF89 | ncoils:Coil | PANTHER:PTHR12280 |
| PANTHER:PTHR12280:SF31 | PFAM:PF01937 | SUPFAM:SSF111321 | UniParc:UPI0002767C98 | UniProt:K4B488 | MapMan:35.1 |
Description
No Description!
Coordinates
chr1:-:98341029..98344341
Molecular Weight (calculated)
17183.6 Da
IEP (calculated)
4.401
GRAVY (calculated)
0.082
Length
152 amino acids
Sequence
(BLAST)
(BLAST)
001: MYDYATHTLV SVVDVSIPYC SNNQTQFPDE ENAKAISLFE DVVQLNDAIE DEAKRMENLV KGIFAGNLFD LGSAQLACGA ILKGWHFFLA SCQNLIPRPW
101: VIDDLDTFIT KCSRESWKKV ILAANDLRSI NDVTYPELVK IISKVVEMLF NF
101: VIDDLDTFIT KCSRESWKKV ILAANDLRSI NDVTYPELVK IISKVVEMLF NF
001: MVVHRIALIR ELILRELGFR DIFKKVKDEE NAKAISLFPE VVRLSDAIND EGKRIENLVR GIFAGNIFDL GSAQLAEVFS KDGMSFLASC QNLVSRPWVI
101: DDLDNFQARW LKKPWKKAVI FVDNSGADII LGILPFAREM LRLGMQVVLA ANELPSINDV TYIELAEILS KLNDENGQLM GVDTSNLLIA NSGNDLPVID
201: LARVSQEVAY LSSDADLVIL EGMGRGIETN LYAQFKCDSL KIGMVKHPEV AQFLGGRLYD CVIKYNEVQI
101: DDLDNFQARW LKKPWKKAVI FVDNSGADII LGILPFAREM LRLGMQVVLA ANELPSINDV TYIELAEILS KLNDENGQLM GVDTSNLLIA NSGNDLPVID
201: LARVSQEVAY LSSDADLVIL EGMGRGIETN LYAQFKCDSL KIGMVKHPEV AQFLGGRLYD CVIKYNEVQI
Arabidopsis Description
At4g35360/F23E12_80 [Source:UniProtKB/TrEMBL;Acc:Q8W4Q1]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.