Factsheet for PGSC0003DMT400038080

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 3
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
VIT_03s0038g04010.t01	Wine grape	cytosol	85.44	84.74
KRH38729	Soybean	cytosol, nucleus	83.24	82.56
Os06t0325500-01	Rice	extracellular, plasma membrane	77.75	77.53
GSMUA_Achr9P12370_001	Banana	cytosol	77.75	76.9
EER88334	Sorghum	cytosol, plastid	75.82	75.62
TraesCS7B01G193200.1	Wheat	cytosol, plastid	75.55	75.34
TraesCS7D01G228000.1	Wheat	golgi, unclear	75.27	75.07
TraesCS7A01G226400.1	Wheat	cytosol, plastid	75.0	74.79
PGSC0003DMT400043345	Potato	cytosol	85.99	72.12
Zm00001d045911_P002	Maize	cytosol, plastid	75.82	67.15
Solyc01g112270.1.1	Tomato	cytosol	27.75	66.45
HORVU3Hr1G078460.1	Barley	mitochondrion	12.36	31.91
PGSC0003DMT400046738	Potato	cytosol	29.4	11.88
PGSC0003DMT400035152	Potato	cytosol	13.19	11.27

Protein Annotations

EnsemblPlants:PGSC0003DMT400038080	EnsemblPlantsGene:PGSC0003DMG400014681	EntrezGene:102593444	Gene3D:1.20.1700.10	Gene3D:3.40.50.10880	InterPro:AF1104-like_sf
InterPro:At2g17340_3_helix_bundle	InterPro:DUF89	InterPro:IPR035073	InterPro:UCP030210	KEGG:00770+2.7.1.33	PANTHER:PTHR12280
PANTHER:PTHR12280:SF31	PFAM:PF01937	PGSC:PGSC0003DMG400014681	PIRSF:PIRSF030210	RefSeq:XP_006364340.1	SUPFAM:SSF111321
UniParc:UPI000296965E	UniProt:M1B6A6	MapMan:35.1	:	:	:

Description

Pantothenate kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400014681]

Coordinates

chr1:-:88420646..88435054

Molecular Weight (calculated)

40839.0 Da

IEP (calculated)

4.670

GRAVY (calculated)

-0.133

Length

364 amino acids

Sequence
(BLAST)

001: MESSGELVPF PLLMTCNYRA CTIPYRFPSN NPTKPTPTEL SWIHVFMNSI PSFRKRAESD DTVPDALSRA EKFAHRYTEI LEDLKKDPKS HGGPPDGILL
101: CRLREQVLRE LGFRDIFKKV KDEENAKAIS LFEDVVHLND AIEDEAKRME NLVKGIFAGN LFDLGSAQLA ELFSRDGISF LASCQNLVPR PWVIDDLDTF
201: ITKWSRESWK KAVIFVDNSG ADIILGILPF TRELLRHGTQ VILAANDLPS INDVTYPELV EIISKLKDEQ GKLVGVDTSN LLVANSGNDL PVIDLTGISQ
301: ELAYLASDAD LVILEGMGRG IETNLYAQFR CDSLKIGMVK HPEVVEFLGG RLYDCVFKYN EVLE

Best Arabidopsis Sequence Match ( AT2G17340.1 )
(BLAST)

001: MESDSEMVPF PQLPMPIENN YRACTIPYRF PSDDPKKATP NEISWINVFA NSIPSFKKRA ESDITVPDAP ARAEKFAERY AGILEDLKKD PESHGGPPDG
101: ILLCRLREQV LRELGFRDIF KKVKDEENAK AISLFPQVVS LSDAIEDDGK RLENLVRGIF AGNIFDLGSA QLAEVFSRDG MSFLASCQNL VPRPWVIDDL
201: ENFQAKWINK SWKKAVIFVD NSGADIILGI LPFARELLRR GAQVVLAANE LPSINDITCT ELTEILSQLK DENGQLLGVD TSKLLIANSG NDLPVIDLSR
301: VSQELAYLSS DADLVIVEGM GRGIETNLYA QFKCDSLKIG MVKHLEVAEF LGGRLYDCVF KFNEVQS

Arabidopsis Description

Uncharacterized protein At2g17340 [Source:UniProtKB/Swiss-Prot;Acc:Q949P3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.