Factsheet for PGSC0003DMT400043345

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
nucleus 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Solyc10g074590.1.1	Tomato	cytosol	80.65	95.37
PGSC0003DMT400038080	Potato	cytosol	72.12	85.99
Bra011609.1-P	Field mustard	cytosol	70.05	82.83
CDX75497	Canola	cytosol	70.05	82.83
AT4G35360.1	Thale cress	cytosol	69.82	82.56
CDX69133	Canola	cytosol	69.82	82.56
AT2G17340.1	Thale cress	cytosol	69.59	82.29
GSMUA_Achr9P12370_001	Banana	cytosol	69.12	81.52
Os06t0325500-01	Rice	extracellular, plasma membrane	66.82	79.45
EER88334	Sorghum	cytosol, plastid	66.59	79.18
AT2G17320.1	Thale cress	cytosol	65.44	78.67
TraesCS7D01G228000.1	Wheat	golgi, unclear	65.9	78.36
CDX87995	Canola	cytosol	64.98	78.12
Bra009651.1-P	Field mustard	cytosol	64.98	78.12
TraesCS7A01G226400.1	Wheat	cytosol, plastid	65.67	78.08
TraesCS7B01G193200.1	Wheat	cytosol, plastid	65.67	78.08
CDY07861	Canola	cytosol	65.21	77.96
Zm00001d045911_P002	Maize	cytosol, plastid	66.59	70.32
HORVU3Hr1G078460.1	Barley	mitochondrion	11.75	36.17
PGSC0003DMT400046738	Potato	cytosol	26.96	12.99
PGSC0003DMT400035152	Potato	cytosol	11.75	11.97

Protein Annotations

EnsemblPlants:PGSC0003DMT400043345	EnsemblPlantsGene:PGSC0003DMG400016830	EntrezGene:102604710	Gene3D:1.20.1700.10	Gene3D:3.40.50.10880	InterPro:AF1104-like_sf
InterPro:At2g17340_3_helix_bundle	InterPro:DUF89	InterPro:IPR035073	KEGG:00770+2.7.1.33	PANTHER:PTHR12280	PANTHER:PTHR12280:SF31
PFAM:PF01937	PGSC:PGSC0003DMG400016830	SUPFAM:SSF111321	UniParc:UPI000295C650	UniProt:M1BEH2	MapMan:35.1

Description

Pantothenate kinase [Source:PGSC_GENE;Acc:PGSC0003DMG400016830]

Coordinates

chr10:-:48157983..48165902

Molecular Weight (calculated)

48363.9 Da

IEP (calculated)

4.835

GRAVY (calculated)

-0.149

Length

434 amino acids

Sequence
(BLAST)

001: MESSGELVPF PLLTTPIESN YRACTIPYRF PSDNPKKPTP TELSWINLFL NSIPSFRKRA ESDDTVPDAP IRAEKFAQSC ADSSLLMSHP CGILQKYTTF
101: VESDTHPLTF LKSPSNIAGT HSVSVMSRML QQFDEYTKEC RPNEAKYSAI LEDIKKDPES HGGPPDCILL CRLREQVLRE VGFRDIFKKV KDEENAKAIS
201: LFKDVVCLND AIEDEAKRVE NLVRGIFAGN IFDLGSAKLA ELFSEDGMSF LASCQNLVPR PWVIDDLDIF ITKWSKKTWK KAVIFVDNSG ADVILGILPF
301: ARELLRHGAQ VVLAANDLPS INDVTYPELV EIISKLKDEH GKLIDVDTSN LLVANSGNDL PVIDLTTVSQ ELAYLASDAD LVILEGMGRG IETNLYARFK
401: CDSLKIGMVK HPEVAQFLGG RLYDCVFKYN EASS

Best Arabidopsis Sequence Match ( AT2G17340.1 )
(BLAST)

001: MESDSEMVPF PQLPMPIENN YRACTIPYRF PSDDPKKATP NEISWINVFA NSIPSFKKRA ESDITVPDAP ARAEKFAERY AGILEDLKKD PESHGGPPDG
101: ILLCRLREQV LRELGFRDIF KKVKDEENAK AISLFPQVVS LSDAIEDDGK RLENLVRGIF AGNIFDLGSA QLAEVFSRDG MSFLASCQNL VPRPWVIDDL
201: ENFQAKWINK SWKKAVIFVD NSGADIILGI LPFARELLRR GAQVVLAANE LPSINDITCT ELTEILSQLK DENGQLLGVD TSKLLIANSG NDLPVIDLSR
301: VSQELAYLSS DADLVIVEGM GRGIETNLYA QFKCDSLKIG MVKHLEVAEF LGGRLYDCVF KFNEVQS

Arabidopsis Description

Uncharacterized protein At2g17340 [Source:UniProtKB/Swiss-Prot;Acc:Q949P3]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.