Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- cytosol 3
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers | ||||||||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
PPI
No PPI Data
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| CDY07861 | Canola | cytosol | 86.98 | 86.5 |
| Bra009651.1-P | Field mustard | cytosol | 85.87 | 85.87 |
| CDX87995 | Canola | cytosol | 85.87 | 85.87 |
| AT2G17340.1 | Thale cress | cytosol | 87.26 | 85.83 |
| AT4G35360.1 | Thale cress | cytosol | 82.55 | 81.2 |
| KRH38729 | Soybean | cytosol, nucleus | 80.89 | 79.56 |
| VIT_03s0038g04010.t01 | Wine grape | cytosol | 79.5 | 78.2 |
| Solyc10g074590.1.1 | Tomato | cytosol | 79.22 | 77.93 |
| GSMUA_Achr9P12370_001 | Banana | cytosol | 76.18 | 74.73 |
| EER88334 | Sorghum | cytosol, plastid | 73.68 | 72.88 |
| Os06t0325500-01 | Rice | extracellular, plasma membrane | 73.41 | 72.6 |
| TraesCS7D01G228000.1 | Wheat | golgi, unclear | 72.85 | 72.05 |
| TraesCS7B01G193200.1 | Wheat | cytosol, plastid | 72.58 | 71.78 |
| TraesCS7A01G226400.1 | Wheat | cytosol, plastid | 72.58 | 71.78 |
| KRH34342 | Soybean | cytosol | 39.06 | 71.21 |
| KRG92458 | Soybean | plastid | 70.36 | 69.78 |
| PGSC0003DMT400043345 | Potato | cytosol | 78.67 | 65.44 |
| Zm00001d045911_P002 | Maize | cytosol, plastid | 73.41 | 64.48 |
| KRG92457 | Soybean | plastid | 71.75 | 61.08 |
| KRH30808 | Soybean | mitochondrion | 41.55 | 45.32 |
| HORVU3Hr1G078460.1 | Barley | mitochondrion | 13.85 | 35.46 |
| AT4G32180.1 | Thale cress | cytosol | 31.86 | 12.76 |
| AT1G60440.1 | Thale cress | cytosol | 12.74 | 12.01 |
Protein Annotations
| KEGG:00770+2.7.1.33 | Gene3D:1.20.1700.10 | Gene3D:3.40.50.10880 | MapMan:35.1 | EntrezGene:816239 | UniProt:A0A178VQN4 |
| ProteinID:AEC06613.1 | InterPro:AF1104-like_sf | EMBL:AK317424 | ArrayExpress:AT2G17320 | EnsemblPlantsGene:AT2G17320 | RefSeq:AT2G17320 |
| TAIR:AT2G17320 | RefSeq:AT2G17320-TAIR-G | EnsemblPlants:AT2G17320.1 | TAIR:AT2G17320.1 | InterPro:At2g17340_3_helix_bundle | UniProt:B9DH75 |
| InterPro:DUF89 | GO:GO:0003674 | GO:GO:0003824 | GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009987 |
| GO:GO:0016301 | GO:GO:0016310 | GO:GO:0016740 | InterPro:IPR035073 | RefSeq:NP_179324.2 | ProteinID:OAP08116.1 |
| PFAM:PF01937 | PIRSF:PIRSF030210 | PO:PO:0000293 | PANTHER:PTHR12280 | PANTHER:PTHR12280:SF31 | SUPFAM:SSF111321 |
| InterPro:UCP030210 | UniParc:UPI000034ED2D | SEG:seg | : | : | : |
Description
AT2G17320 protein [Source:UniProtKB/TrEMBL;Acc:B9DH75]
Coordinates
chr2:-:7533455..7536004
Molecular Weight (calculated)
40074.1 Da
IEP (calculated)
5.047
GRAVY (calculated)
-0.090
Length
361 amino acids
Sequence
(BLAST)
(BLAST)
001: MIPFPLLPTP IETNYRACTI PYRFPSDNLK KATPTEISWI NVFANSIPSF KKRAESDTSV PDAPARAKIF EQRYAGFLEG WKKDPESNGG PPDGVILGRV
101: REHLLRELGF RDIFKKVKDE ENAKAISLFP EVVSLSDAIE DDGERLENLV RGIFAGNIFD LGSAQLAEVF SRDGISFLAT SQNLVPRPWV IDDLNKFQAK
201: WVKKPWKKAV IFVDNSGADI ILGILPFARE LLRRGIQVVL AANELPAIND VTYTELTDIV SQLKDGNGQL IGVDTSKLLI ANSGNDLAVI DLSRVSHELA
301: YLSSDADLVI LEGMGRGIET NLYAQFKCDS LKIGMVKHVE VAQFLGGRLY DCVFKFNEVQ S
101: REHLLRELGF RDIFKKVKDE ENAKAISLFP EVVSLSDAIE DDGERLENLV RGIFAGNIFD LGSAQLAEVF SRDGISFLAT SQNLVPRPWV IDDLNKFQAK
201: WVKKPWKKAV IFVDNSGADI ILGILPFARE LLRRGIQVVL AANELPAIND VTYTELTDIV SQLKDGNGQL IGVDTSKLLI ANSGNDLAVI DLSRVSHELA
301: YLSSDADLVI LEGMGRGIET NLYAQFKCDS LKIGMVKHVE VAQFLGGRLY DCVFKFNEVQ S
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.