CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: mitochondrion

Predictor Summary:

plastid 3
mitochondrion 6

Predictors

GFP

MS/MS

Papers

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG92458	Soybean	plastid	54.08	49.18
KRH34342	Soybean	cytosol	29.31	48.99
KRG92457	Soybean	plastid	58.91	45.99
KRH38729	Soybean	cytosol, nucleus	50.15	45.23
AT2G17340.1	Thale cress	cytosol	46.83	42.23
CDX75497	Canola	cytosol	46.83	42.23
Bra011609.1-P	Field mustard	cytosol	46.83	42.23
CDX69133	Canola	cytosol	46.22	41.69
AT4G35360.1	Thale cress	cytosol	46.22	41.69
AT2G17320.1	Thale cress	cytosol	45.32	41.55
GSMUA_Achr9P12370_001	Banana	cytosol	45.32	40.76
CDX87995	Canola	cytosol	44.11	40.44
Bra009651.1-P	Field mustard	cytosol	44.11	40.44
CDY07861	Canola	cytosol	44.11	40.22
Os06t0325500-01	Rice	extracellular, plasma membrane	43.81	39.73
EER88334	Sorghum	cytosol, plastid	42.9	38.9
TraesCS7D01G228000.1	Wheat	golgi, unclear	41.39	37.53
TraesCS7B01G193200.1	Wheat	cytosol, plastid	41.39	37.53
TraesCS7A01G226400.1	Wheat	cytosol, plastid	41.39	37.53
Zm00001d045911_P002	Maize	cytosol, plastid	42.9	34.55
KRH33424	Soybean	cytosol	4.23	13.21
KRG90159	Soybean	cytosol	7.25	12.77
KRG99350	Soybean	cytosol	10.88	8.72
KRH03287	Soybean	cytosol	23.26	8.54
KRH19967	Soybean	cytosol	23.57	8.48
KRH54393	Soybean	cytosol	23.26	8.44
KRH55310	Soybean	cytosol	11.48	7.38
KRH45653	Soybean	cytosol	9.06	6.99
KRH57072	Soybean	cytosol	6.34	6.48

Protein Annotations

EMBL:ACUP02007074	EnsemblPlants:KRH30808	EnsemblPlantsGene:GLYMA_11G207800	Gene3D:1.20.1700.10	InterPro:AF1104-like_sf	InterPro:At2g17340_3_helix_bundle
InterPro:DUF89	InterPro:IPR035073	KEGG:00770+2.7.1.33	MetaCyc:PWY-3961	PANTHER:PTHR12280	PANTHER:PTHR12280:SF31
PFAM:PF01937	ProteinID:KRH30808	ProteinID:KRH30808.1	SEG:seg	SUPFAM:SSF111321	UniParc:UPI0006ED679E
UniProt:A0A0R0HTU3	MapMan:35.1	:	:	:	:

Description

hypothetical protein

Coordinates

chr11:-:29647089..29651913

Molecular Weight (calculated)

37471.4 Da

IEP (calculated)

6.793

GRAVY (calculated)

0.109

Length

331 amino acids

Sequence
(BLAST)

001: MKIFHRSSFV LRSSIARALA FVDSTHSSLS TALWRSTMPT PSVVTLSRIF SASPRFSSRH SNKLSSMTAS HQIYMMSTRS KEVGGVAWHV ELISHLLLIH
101: FLQKRYARIL EDFKNDPASQ DMPLDILILS RLREQVLREQ GFRDIFKKIK LAEVFSRDGV SFSITCQNLV PQPWIIDDDL ETFRMAWSKK SWKKAIIIFV
201: DNSGADIILV ILAANDLPSI NDVTYSDLIE IIPKLKDEEG RLTGVSTSNL LIANSRNDLP LLAYDASSLT CFFLVLFNGF HVIDLTRVSQ ELAYLANDVD
301: LVMLEGMVKH PEVAEFLGSC LYDCITKYDE V

Best Arabidopsis Sequence Match ( AT4G35360.1 )
(BLAST)

001: MESDSEMVAL PLLPTPIESN YRACTIPYRF PSDNPRKATP TEISWIDLFS NSIPSFKERA ESDTTVPDAP VRAEKFAKRY AEILEDLKKD PESHGGPPDC
101: ILLCRIRELI LRELGFRDIF KKVKDEENAK AISLFPEVVR LSDAINDEGK RIENLVRGIF AGNIFDLGSA QLAEVFSKDG MSFLASCQNL VSRPWVIDDL
201: DNFQARWLKK PWKKAVIFVD NSGADIILGI LPFAREMLRL GMQVVLAANE LPSINDVTYI ELAEILSKLN DENGQLMGVD TSNLLIANSG NDLPVIDLAR
301: VSQEVAYLSS DADLVILEGM GRGIETNLYA QFKCDSLKIG MVKHPEVAQF LGGRLYDCVI KYNEVQI

Arabidopsis Description

At4g35360/F23E12_80 [Source:UniProtKB/TrEMBL;Acc:Q8W4Q1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.