CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
mitochondrion 1
plastid 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
Predotar:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
CDX87995	Canola	cytosol	96.42	96.95
AT2G17320.1	Thale cress	cytosol	86.5	86.98
AT2G17340.1	Thale cress	cytosol	85.4	84.47
CDX75497	Canola	cytosol	82.09	81.2
CDX69133	Canola	cytosol	80.99	80.11
KRH38729	Soybean	cytosol, nucleus	79.89	79.02
VIT_03s0038g04010.t01	Wine grape	cytosol	79.06	78.2
Solyc10g074590.1.1	Tomato	cytosol	77.41	76.57
GSMUA_Achr9P12370_001	Banana	cytosol	73.28	72.28
EER88334	Sorghum	cytosol, plastid	72.18	71.78
TraesCS7D01G228000.1	Wheat	golgi, unclear	71.35	70.96
KRH34342	Soybean	cytosol	38.57	70.71
TraesCS7A01G226400.1	Wheat	cytosol, plastid	71.07	70.68
TraesCS7B01G193200.1	Wheat	cytosol, plastid	71.07	70.68
Os06t0325500-01	Rice	extracellular, plasma membrane	70.52	70.14
KRG92458	Soybean	plastid	69.42	69.23
PGSC0003DMT400043345	Potato	cytosol	77.96	65.21
Zm00001d045911_P002	Maize	cytosol, plastid	71.9	63.5
KRG92457	Soybean	plastid	70.25	60.14
KRH30808	Soybean	mitochondrion	40.22	44.11
HORVU3Hr1G078460.1	Barley	mitochondrion	14.05	36.17
CDX75226	Canola	cytosol	31.41	12.53
CDX68824	Canola	cytosol	31.13	12.47
CDY61390	Canola	cytosol	30.85	12.46
CDY40427	Canola	cytosol	9.64	11.74
CDY47225	Canola	cytosol	14.6	9.12
CDY53055	Canola	cytosol	14.6	9.11
CDY24491	Canola	cytosol	1.1	6.25

Protein Annotations

EnsemblPlants:CDY07861	EnsemblPlantsGene:GSBRNA2T00125034001	Gene3D:1.20.1700.10	Gene3D:3.40.50.10880	InterPro:AF1104-like_sf	InterPro:At2g17340_3_helix_bundle
InterPro:DUF89	InterPro:IPR035073	InterPro:UCP030210	KEGG:00770+2.7.1.33	PANTHER:PTHR12280	PANTHER:PTHR12280:SF31
PFAM:PF01937	PIRSF:PIRSF030210	ProteinID:CDY07861	ProteinID:CDY07861.1	SUPFAM:SSF111321	UniParc:UPI0004EE5656
UniProt:A0A078F395	MapMan:35.1	:	:	:	:

Description

BnaC03g47610DBnaC03g47610D protein [Source:UniProtKB/TrEMBL;Acc:A0A078F395]

Coordinates

chrLK031981:+:593335..595913

Molecular Weight (calculated)

40300.1 Da

IEP (calculated)

4.471

GRAVY (calculated)

-0.133

Length

363 amino acids

Sequence
(BLAST)

001: MEMVAFPLIP KPIEVNYRAC TIPYRFPSDN PKIATPTEIS WVNVFANSIP SFKKRAESDT TVPDAPARAQ KFAERYGGIL EDWKKDPESH GGPPDGVSLG
101: RAREHLLREL GFMDIFKKVK DEENAKAISL FPEVVSLSDA IEDEGERLQN LVRGMFAGNI FDLGSAQLAE VFSRDGLSFL ATSQNLVPRP WVIDDLDSFQ
201: SNWFKNRWKK AVIFVDNSGA DIILGILPFA REMLRRGMQV VLAANDLPAI NDVTYTELTE ILSQLKDEDG QLIGVDTSKL VIANSGNDLA VIDLSSVSQE
301: LADISSDADL VIIEGMGRGI ETNLYAQFKC DSLKIGMVKH IEVAEFLGGR LYDCVFKYNE VQS

Best Arabidopsis Sequence Match ( AT2G17320.1 )
(BLAST)

001: MIPFPLLPTP IETNYRACTI PYRFPSDNLK KATPTEISWI NVFANSIPSF KKRAESDTSV PDAPARAKIF EQRYAGFLEG WKKDPESNGG PPDGVILGRV
101: REHLLRELGF RDIFKKVKDE ENAKAISLFP EVVSLSDAIE DDGERLENLV RGIFAGNIFD LGSAQLAEVF SRDGISFLAT SQNLVPRPWV IDDLNKFQAK
201: WVKKPWKKAV IFVDNSGADI ILGILPFARE LLRRGIQVVL AANELPAIND VTYTELTDIV SQLKDGNGQL IGVDTSKLLI ANSGNDLAVI DLSRVSHELA
301: YLSSDADLVI LEGMGRGIET NLYAQFKCDS LKIGMVKHVE VAQFLGGRLY DCVFKFNEVQ S

Arabidopsis Description

AT2G17320 protein [Source:UniProtKB/TrEMBL;Acc:B9DH75]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.