Factsheet for Solyc10g074590.1.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, plastid
BaCelLo:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	plastid
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

No PPI Data

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
Bra011609.1-P	Field mustard	cytosol	82.29	82.29
CDX75497	Canola	cytosol	82.29	82.29
AT2G17340.1	Thale cress	cytosol	82.02	82.02
CDX69133	Canola	cytosol	81.74	81.74
AT4G35360.1	Thale cress	cytosol	81.47	81.47
PGSC0003DMT400043345	Potato	cytosol	95.37	80.65
GSMUA_Achr9P12370_001	Banana	cytosol	80.65	80.43
Os06t0325500-01	Rice	extracellular, plasma membrane	79.56	80.0
AT2G17320.1	Thale cress	cytosol	77.93	79.22
EER88334	Sorghum	cytosol, plastid	77.66	78.08
CDX87995	Canola	cytosol	76.29	77.56
Bra009651.1-P	Field mustard	cytosol	76.29	77.56
CDY07861	Canola	cytosol	76.57	77.41
TraesCS7D01G228000.1	Wheat	golgi, unclear	76.84	77.26
TraesCS7A01G226400.1	Wheat	cytosol, plastid	76.57	76.99
TraesCS7B01G193200.1	Wheat	cytosol, plastid	76.57	76.99
Zm00001d045911_P002	Maize	cytosol, plastid	77.38	69.1
Solyc01g112270.1.1	Tomato	cytosol	24.52	59.21
HORVU3Hr1G078460.1	Barley	mitochondrion	13.62	35.46
Solyc03g112910.2.1	Tomato	cytosol, plastid	30.52	12.43
Solyc05g005250.2.1	Tomato	cytosol	13.9	11.97

Protein Annotations

EnsemblPlants:Solyc10g074590.1.1	EnsemblPlantsGene:Solyc10g074590.1	Gene3D:1.20.1700.10	Gene3D:3.40.50.10880	InterPro:AF1104-like_sf	InterPro:At2g17340_3_helix_bundle
InterPro:DUF89	InterPro:IPR035073	InterPro:UCP030210	KEGG:00770+2.7.1.33	PANTHER:PTHR12280	PANTHER:PTHR12280:SF31
PFAM:PF01937	PIRSF:PIRSF030210	SUPFAM:SSF111321	UniParc:UPI00027698CA	UniProt:K4D1Q1	MapMan:35.1

Description

No Description!

Coordinates

chr10:-:58141419..58149207

Molecular Weight (calculated)

40873.0 Da

IEP (calculated)

4.719

GRAVY (calculated)

-0.109

Length

367 amino acids

Sequence
(BLAST)

001: MESSGELVPF PLLTTPIESN YRACTIPYRF PSDNPKKPTP TELSWIDLFM NSIPSFRKRA ESDDSVPDAP IRAEKFAQRY SAILEDMKKD PESHGGPPDC
101: ILLCRLREQV LREVGFRDIF KKVKDEENAK AISLFKDVVS LNDAIEDEAK RVENLVRGIF AGNIFDLGSA KLAELFSEDG ISFLASFQNL VPRPWVIDDL
201: DVFITKWSKK TWKKAVIFVD NSGADVILGI LPFARELLRH GAQVVLAAND LPSINDVTYP ELVEIISKLK DEHGKLIGVD TSNLLVANSG NDLPVIDLTT
301: VSQELAYLAS DADLVIVEGM GRGIETNLYA RFKCDSLKIG MVKHPEVAQF LGGRLYDCVF KFNEASS

Best Arabidopsis Sequence Match ( AT4G35360.1 )
(BLAST)

001: MESDSEMVAL PLLPTPIESN YRACTIPYRF PSDNPRKATP TEISWIDLFS NSIPSFKERA ESDTTVPDAP VRAEKFAKRY AEILEDLKKD PESHGGPPDC
101: ILLCRIRELI LRELGFRDIF KKVKDEENAK AISLFPEVVR LSDAINDEGK RIENLVRGIF AGNIFDLGSA QLAEVFSKDG MSFLASCQNL VSRPWVIDDL
201: DNFQARWLKK PWKKAVIFVD NSGADIILGI LPFAREMLRL GMQVVLAANE LPSINDVTYI ELAEILSKLN DENGQLMGVD TSNLLIANSG NDLPVIDLAR
301: VSQEVAYLSS DADLVILEGM GRGIETNLYA QFKCDSLKIG MVKHPEVAQF LGGRLYDCVI KYNEVQI

Arabidopsis Description

At4g35360/F23E12_80 [Source:UniProtKB/TrEMBL;Acc:Q8W4Q1]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.