Factsheet for Solyc05g005250.2.1

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 1
cytosol 4
plastid 1
mitochondrion 1

Predictors

GFP

MS/MS

Papers

PPI

Inferred distinct locusB in Crop

locusB	locations
Solyc05g005250.2.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G60440.1	Solyc05g005250.2.1	AT1G60440.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
PGSC0003DMT400035152	Potato	cytosol	92.25	92.25
AT1G60440.1	Thale cress	cytosol	58.45	65.01
CDY40427	Canola	cytosol	45.07	64.43
VIT_01s0127g00490.t01	Wine grape	cytosol	60.8	61.81
KRG99350	Soybean	cytosol	57.04	58.84
KRH45653	Soybean	cytosol	55.87	55.48
GSMUA_Achr6P09090_001	Banana	cytosol	54.46	49.89
CDY47225	Canola	cytosol	59.86	43.89
CDY53055	Canola	cytosol	59.15	43.3
Bra027158.1-P	Field mustard	cytosol	58.45	42.78
HORVU5Hr1G033110.2	Barley	cytosol	30.28	28.92
Solyc03g112910.2.1	Tomato	cytosol, plastid	55.87	26.42
KXG19566	Sorghum	cytosol	38.97	25.04
TraesCS7B01G071900.3	Wheat	cytosol	38.26	24.92
TraesCS7A01G167300.1	Wheat	cytosol	38.03	24.77
Zm00001d044985_P006	Maize	cytosol, extracellular	38.03	24.7
TraesCS7D01G167900.1	Wheat	cytosol	37.79	24.62
Os06t0207000-01	Rice	cytosol	37.79	24.17
Solyc01g112270.1.1	Tomato	cytosol	5.63	15.79
Solyc10g074590.1.1	Tomato	cytosol	11.97	13.9

Protein Annotations

KEGG:00770+2.7.1.33	Gene3D:1.10.8.780	Gene3D:3.30.420.40	Gene3D:3.30.420.510	MapMan:7.4.2	EMBL:AB211526
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004594	GO:GO:0005488	GO:GO:0005524
GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0015937
GO:GO:0016301	GO:GO:0016310	GO:GO:0016740	PFAM:PF03630	PANTHER:PTHR12280	PANTHER:PTHR12280:SF34
UniProt:Q53U34	SUPFAM:SSF53067	EnsemblPlantsGene:Solyc05g005250.2	EnsemblPlants:Solyc05g005250.2.1	TIGRFAMs:TIGR00555	InterPro:Type_II_PanK
UniParc:UPI0000509117	SEG:seg	:	:	:	:

Description

Pantothenate kinase 1 [Source:Projected from Arabidopsis thaliana (AT1G60440) UniProtKB/Swiss-Prot;Acc:O80765]

Coordinates

chr5:+:195242..204180

Molecular Weight (calculated)

46947.1 Da

IEP (calculated)

6.942

GRAVY (calculated)

-0.232

Length

426 amino acids

Sequence
(BLAST)

001: MEVKGIDGKL EKSDSTSADE ISHLSIDIGG SLIKIVYFST NSKCSTNDEA PTLSKERQEV PNGDLNHHIL SGRLYFIKFE TSKIEDCIKF LSSKKLQKCG
101: AQCHHSHAVD KIKIKATGGG AFKFADLFKE KLGLTLDKVE EMESLVTGAN FLLKAANHEV YTYIGGQKEY VQIDQNDLYP YLLVNIGSGV SMIKVDGDGK
201: FQRVSGTSVG GGTFLGLGKL LTKCQSFDEL LELSHLGNNR VIDMLVGDIY GGLDYSKIGL ASTAIASSFG KAISENKELE DYKPEDIARS LLRMISNNIG
301: QIAYLNALRF GLKRIFLGGF FIRDHAYTMD TISVAVDFWS KGEAKAMFLR HEGFLGALGA FMNYKDGSTD SMPPQLVEQQ AAKRSSSCIV DRIHNSTHVQ
401: ENENGATDCR LRVSSSFKIY DEVKRC

Best Arabidopsis Sequence Match ( AT4G32180.2 )
(BLAST)

001: MAGQEDEYDP ILDNKREAEA KSQVSVAADK NMAPSTSGTP IHRSGSRPQL DLSKAEIQGN LEERDPTILL PNQSDDISHL ALDIGGSLIK LLYFSRHEDY
101: SNDDDKRKRT IKERLGITNG NLRSYPVLGG RLHFVKFETH KINECLDFIH SKQLHRRDPY PWSSKTLPLG TGVIKVTGGG AFKFADLFKE RLGVSIEKED
201: EMHCLVSGAN FLLKAIRHEA FTHMEGEKEF VQIDPNDLYP YLLVNVGSGV SIIKVDGEGK FERVSGTNVG GGTYWGLGRL LTKCKSFDEL LELSQKGDNS
301: AIDMLVGDIY GGMDYSKIGL SASTIASSFG KAISENKELD DYRPEDISLS LLRMISYNIG QISYLNALRF GLKRIFFGGF FIRGHAYTMD TISFAVHFWS
401: KGEMQAMFLR HEGFLGALGA FMSYEKHGLD DLMSHQLVER FPMGAPYTGG NIHGPPLGDL DEKISWMEKF VRRGTEITAP VPMTPSKTTG LGGFEVPSSR
501: GSALRSDASA LNVGVLHLVP TLEVFPLLAD PKTYEPNTID LSDQGEREYW LKVLSEHLPD LVDTAVASEG GTEDAKRRGD AFARAFSAHL ARLMEEPAAY
601: GKLGLANLLE LREECLREFQ FVDAYRSIKQ RENEASLAVL PDLLEELDSM SEEARLLTLI EGVLAANIFD WGSRACVDLY HKGTIIEIYR MSRNKMQRPW
701: RVDDFDAFKE RMLGSGGKQP HRHKRALLFV DNSGADVILG MLPLAREFLR RGTEVVLVAN SLPALNDVTA MELPDIVAGA AKV

Arabidopsis Description

PANK2PANK2 [Source:UniProtKB/TrEMBL;Acc:A0A178V4D0]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.