Factsheet for Os06t0207000-01

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

nucleus 2
cytosol 4
mitochondrion 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, mitochondrion, nucleus
BaCelLo:	nucleus
EpiLoc:	cytosol
MultiLoc:	cytosol
Plant-mPloc:	nucleus
PProwler:	mitochondrion
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
Os06t0207000-01

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G60440.1	Os06t0207000-01	AT1G60440.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G167300.1	Wheat	cytosol	82.73	84.25
TraesCS7D01G167900.1	Wheat	cytosol	82.58	84.1
TraesCS7B01G071900.3	Wheat	cytosol	82.58	84.1
Zm00001d044985_P006	Maize	cytosol, extracellular	81.53	82.77
KXG19566	Sorghum	cytosol	81.83	82.2
HORVU7Hr1G035030.7	Barley	cytosol, mitochondrion, plastid	79.58	78.17
GSMUA_Achr9P27330_001	Banana	cytosol	65.92	66.72
CDY40427	Canola	cytosol	20.42	45.64
AT1G60440.1	Thale cress	cytosol	24.77	43.08
VIT_01s0127g00490.t01	Wine grape	cytosol	26.58	42.24
KRG99350	Soybean	cytosol	25.68	41.4
KRH45653	Soybean	cytosol	25.08	38.93
Solyc05g005250.2.1	Tomato	cytosol	24.17	37.79
PGSC0003DMT400035152	Potato	cytosol	24.02	37.56
CDY47225	Canola	cytosol	28.53	32.7
CDY53055	Canola	cytosol	28.38	32.47
Bra027158.1-P	Field mustard	cytosol	28.23	32.3
Os09t0533100-01	Rice	cytosol, plasma membrane	28.83	25.43
Os06t0325500-01	Rice	extracellular, plasma membrane	6.61	12.05

Protein Annotations

KEGG:00770+2.7.1.33	Gene3D:1.10.8.780	Gene3D:3.30.420.40	Gene3D:3.30.420.510	EntrezGene:4340439	MapMan:7.4.2
EMBL:AK067115	ProteinID:BAD35853.1	ProteinID:BAF19012.1	ProteinID:BAS96706.1	ncoils:Coil	GO:GO:0000166
GO:GO:0003674	GO:GO:0003824	GO:GO:0004594	GO:GO:0005488	GO:GO:0005524	GO:GO:0006139
GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0015937	GO:GO:0016301
GO:GO:0016310	GO:GO:0016740	EnsemblPlantsGene:Os06g0207000	EnsemblPlants:Os06t0207000-01	PFAM:PF03630	PANTHER:PTHR12280
PANTHER:PTHR12280:SF29	UniProt:Q69TF4	SUPFAM:SSF53067	TIGRFAMs:TIGR00555	InterPro:Type_II_PanK	UniParc:UPI00004038E8
RefSeq:XP_015644088.1	SEG:seg	:	:	:	:

Description

Fumble domain containing protein. (Os06t0207000-01)

Coordinates

chr6:+:5420936..5427251

Molecular Weight (calculated)

72303.4 Da

IEP (calculated)

6.560

GRAVY (calculated)

-0.136

Length

666 amino acids

Sequence
(BLAST)

001: MGGLRVDLSG AEIRVDPACG AAADDGGSPP VFLPRQPAAP PLLALDIGGT LIKLVYTASC GGGGAELRFA KFERRRMQEC FDFVRAQGLV HRNGSTMGSS
101: KENIALKASG GGAYKYTEDF REKLGVCLDK VDEMDSVVSG ANFLLQSVPG AAFTHMNGKK SSVDISPNNL FPYLLVNIGS GVSILKVTGN RKFERVTGTH
201: IGGGTMFGLA KLLTGCKSYD EFLQLSQKGD NFVLDLIVKD ICGELVCQKQ GLSTSTLASS FGKVITSKKK LTDYRPEDLA STLLSAFTYN IAQISFLVAS
301: ILHLRRVFFG GSYIRGHKST MQNISYAIDF WSQSKMQAVF LQHEGYLGAL GALMSYGDSG DKNMNLEEMK EEENIHESAT PIDETSTDEH NDGNIFPYLL
401: VNIGSGVSMI EVTGNGKFER IIGSHLGGGT ILGLARLLTG CSSYDEFLEL SQRGNNLAVD LTVGDIYGEH GYPKIGLPAS TTAASFGKVS SSRLSEYKVE
501: DLAAALLNSF TYNIGQIAYF VANLSGLKRI FFRGAYICGH EKTMDKISHS LKYWSKGQVQ TTFLCHEGFL GTLGAFWSYE NMGIDGLAAH EVIREVLLGA
601: PYTGQLPSLP LTHQQDNGED TTIEGEVERL RHDNAVLKAE LERLQRENTE LKAKLVKSGK PNTFYH

Best Arabidopsis Sequence Match ( AT4G32180.2 )
(BLAST)

001: MAGQEDEYDP ILDNKREAEA KSQVSVAADK NMAPSTSGTP IHRSGSRPQL DLSKAEIQGN LEERDPTILL PNQSDDISHL ALDIGGSLIK LLYFSRHEDY
101: SNDDDKRKRT IKERLGITNG NLRSYPVLGG RLHFVKFETH KINECLDFIH SKQLHRRDPY PWSSKTLPLG TGVIKVTGGG AFKFADLFKE RLGVSIEKED
201: EMHCLVSGAN FLLKAIRHEA FTHMEGEKEF VQIDPNDLYP YLLVNVGSGV SIIKVDGEGK FERVSGTNVG GGTYWGLGRL LTKCKSFDEL LELSQKGDNS
301: AIDMLVGDIY GGMDYSKIGL SASTIASSFG KAISENKELD DYRPEDISLS LLRMISYNIG QISYLNALRF GLKRIFFGGF FIRGHAYTMD TISFAVHFWS
401: KGEMQAMFLR HEGFLGALGA FMSYEKHGLD DLMSHQLVER FPMGAPYTGG NIHGPPLGDL DEKISWMEKF VRRGTEITAP VPMTPSKTTG LGGFEVPSSR
501: GSALRSDASA LNVGVLHLVP TLEVFPLLAD PKTYEPNTID LSDQGEREYW LKVLSEHLPD LVDTAVASEG GTEDAKRRGD AFARAFSAHL ARLMEEPAAY
601: GKLGLANLLE LREECLREFQ FVDAYRSIKQ RENEASLAVL PDLLEELDSM SEEARLLTLI EGVLAANIFD WGSRACVDLY HKGTIIEIYR MSRNKMQRPW
701: RVDDFDAFKE RMLGSGGKQP HRHKRALLFV DNSGADVILG MLPLAREFLR RGTEVVLVAN SLPALNDVTA MELPDIVAGA AKV

Arabidopsis Description

PANK2PANK2 [Source:UniProtKB/TrEMBL;Acc:A0A178V4D0]
SUBAcon: [peroxisome]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.