Factsheet for TraesCS7B01G071900.3

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 2
mitochondrion 1
nucleus 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, nucleus
MultiLoc:	cytosol
PProwler:	mitochondrion
WoLF PSORT:	nucleus
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
TraesCS7A01G167300.1
TraesCS7B01G071900.3
TraesCS7D01G167900.1

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G60440.1	TraesCS7A01G167300.1	AT1G60440.1	21798944
AT1G60440.1	TraesCS7B01G071900.3	AT1G60440.1	21798944
AT1G60440.1	TraesCS7D01G167900.1	AT1G60440.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
TraesCS7A01G167300.1	Wheat	cytosol	98.78	98.78
TraesCS7D01G167900.1	Wheat	cytosol	97.86	97.86
HORVU7Hr1G035030.7	Barley	cytosol, mitochondrion, plastid	90.98	87.76
KXG19566	Sorghum	cytosol	84.86	83.71
Zm00001d044985_P006	Maize	cytosol, extracellular	83.79	83.54
Os06t0207000-01	Rice	cytosol	84.1	82.58
GSMUA_Achr9P27330_001	Banana	cytosol	67.74	67.33
CDY40427	Canola	cytosol	20.64	45.3
AT1G60440.1	Thale cress	cytosol	25.69	43.86
VIT_01s0127g00490.t01	Wine grape	cytosol	27.06	42.24
KRG99350	Soybean	cytosol	26.15	41.4
PGSC0003DMT400035152	Potato	cytosol	25.08	38.5
Solyc05g005250.2.1	Tomato	cytosol	24.92	38.26
KRH45653	Soybean	cytosol	24.92	38.0
CDY47225	Canola	cytosol	29.66	33.39
CDY53055	Canola	cytosol	29.36	32.99
Bra027158.1-P	Field mustard	cytosol	29.36	32.99
TraesCS5B01G320900.1	Wheat	cytosol	33.79	24.61
TraesCS7B01G193200.1	Wheat	cytosol, plastid	6.88	12.33

Protein Annotations

KEGG:00770+2.7.1.33	Gene3D:1.10.8.780	Gene3D:3.30.420.40	Gene3D:3.30.420.510	MapMan:7.4.2	ncoils:Coil
GO:GO:0000166	GO:GO:0003674	GO:GO:0003824	GO:GO:0004594	GO:GO:0005488	GO:GO:0005524
GO:GO:0006139	GO:GO:0008150	GO:GO:0008152	GO:GO:0009058	GO:GO:0009987	GO:GO:0015937
GO:GO:0016301	GO:GO:0016740	PFAM:PF03630	PANTHER:PTHR12280	PANTHER:PTHR12280:SF29	SUPFAM:SSF53067
TIGRFAMs:TIGR00555	EnsemblPlantsGene:TraesCS7B01G071900	EnsemblPlants:TraesCS7B01G071900.3	InterPro:Type_II_PanK	TIGR:cd14686	SEG:seg

Description

No Description!

Coordinates

chr7B:+:79301144..79307695

Molecular Weight (calculated)

70827.3 Da

IEP (calculated)

5.446

GRAVY (calculated)

-0.143

Length

654 amino acids

Sequence
(BLAST)

001: MGRRIDLSGA EIRADPGDGS PPIFLPRQPA ASPLLALDIG GTLIKLVYTA SCGAEAELRF AKFERRRLDD CFDFVRAQGL LGCNGTTTGP SKENMTLKAT
101: GGGSYKFGDD FRQKLGVSLD KLDEMDSVVS GANFLLQNVP GAAFTHMSGK RNSIDISPDN LFPYLLVNIG SGVSILKVTG NRKFERVTGT HIGGGTMFGL
201: AKLLTGCKSY DEFLQLSQKG DNFVLDLVVK DICGELACQK QGLSTSTLAS SFGKVITSMK KLADYKPEDL ASALLSAFTY NIAQISFLVA SLLGLRRVFF
301: GGSYIRGHKS TMDNISYALD FWSESQMQAS FLQHEGYLGA LGALMSYGDP RDENLNLEES QEENSHEAAG PTDVTSADEH NDSNIFPYLL VNIGSGVSMI
401: EVIGKGKFER IIGSHLGGGT ILGLARLLTG CSSYEEFLDL SRRGDNLAVD LTVGDIYGER GYPKIGLPAS TTAASFGKVN SGKLSEYKAE DLAAALLNSF
501: TYNIGQIAYF VANLSGLKRI FFRGAYVCGH EKTMDKISRS LKYWSKGEVQ TTFLCHEGFL GTLGAFWSYE NMGIDGLASH EVIREVLLGA PYTGQFPSSP
601: LTPEQENGGN VNAEVEVERL RRDNAVLKSE LERLQRENAE LKAKLVKSDE AATL

Best Arabidopsis Sequence Match ( AT1G60440.1 )
(BLAST)

001: MDPTQISHLA LDIGGTLIKL VYFSANGDYS EESRNGCSVV KGRLCFAKFE TRKIDDCLEF IRFNILHHSG VQQPNGEGHD KLYVKATGGG AFKFADLFKE
101: KLGILFDKED EMCSLVGGVN FLLKTVPREA FTYLDGQKKF VEIDHNDLYP YLLVNIGSGV SMIKVDGDGK YERISGTSLG GGTFLGLGKL LTKCKSFDEL
201: LELSHHGNNR VIDMLVGDIY GGTDYSKIGL SSTAIASSFG KAISDGKELE DYQPEDVARS LLRMISNNIG QIAYLNALRF GLKRIFFGGF FIRGLEYTMD
301: TISVAVHFWS RGEAKAMFLR HEGFLGALGA FTSYNDQSHN DLKPHHHTVQ RAILNCSGHN FRHIPVTSNL NESETIECSI NLV

Arabidopsis Description

PANK1Pantothenate kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:O80765]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.