CropPAL

Subcellular Localization

min:

: max

Winner_takes_all: cytosol

Predictor Summary:

cytosol 4
extracellular 1
endoplasmic reticulum 1
vacuole 1
plasma membrane 1
golgi 1

Predictors

GFP

MS/MS

Papers

Winner Takes All:	cytosol
Any Predictor:	cytosol, secretory
BaCelLo:	cytosol
MultiLoc:	cytosol
PProwler:	secretory
WoLF PSORT:	cytosol
YLoc:	cytosol

PPI

Inferred distinct locusB in Crop

locusB	locations
KRG99350
KRH45653

Inferred from Arabidopsis experimental PPI

Ath locusA	locusB	Ath locusB	Paper
AT1G60440.1	KRG99350	AT1G60440.1	21798944
AT1G60440.1	KRH45653	AT1G60440.1	21798944

Homology

Paralog

locus	Identity	Homology Identity

Ortholog

locus	Homology Species	Location	Identity	Homology Identity
KRG99350	Soybean	cytosol	81.35	84.5
AT1G60440.1	Thale cress	cytosol	55.01	61.62
VIT_01s0127g00490.t01	Wine grape	cytosol	60.14	61.58
CDY40427	Canola	cytosol	41.49	59.73
PGSC0003DMT400035152	Potato	cytosol	55.48	55.87
Solyc05g005250.2.1	Tomato	cytosol	55.48	55.87
KRH57072	Soybean	cytosol	40.09	53.09
GSMUA_Achr6P09090_001	Banana	cytosol	50.58	46.67
Bra027158.1-P	Field mustard	cytosol	54.55	40.21
CDY53055	Canola	cytosol	54.31	40.03
CDY47225	Canola	cytosol	53.61	39.59
HORVU5Hr1G033110.2	Barley	cytosol	29.37	28.25
KRH54393	Soybean	cytosol	54.78	25.77
KRH19967	Soybean	cytosol	54.55	25.43
KRH03287	Soybean	cytosol	53.38	25.39
TraesCS7D01G167900.1	Wheat	cytosol	38.46	25.23
KXG19566	Sorghum	cytosol	38.93	25.19
Os06t0207000-01	Rice	cytosol	38.93	25.08
Zm00001d044985_P006	Maize	cytosol, extracellular	38.23	25.0
TraesCS7A01G167300.1	Wheat	cytosol	38.0	24.92
TraesCS7B01G071900.3	Wheat	cytosol	38.0	24.92
KRH33424	Soybean	cytosol	3.5	14.15
KRH38729	Soybean	cytosol, nucleus	10.96	12.81
KRG92458	Soybean	plastid	9.79	11.54
KRG92457	Soybean	plastid	9.79	9.91
KRH30808	Soybean	mitochondrion	6.99	9.06
KRG90159	Soybean	cytosol	3.26	7.45
KRH34342	Soybean	cytosol	2.8	6.06
KRH55310	Soybean	cytosol	6.53	5.44

Protein Annotations

KEGG:00770+2.7.1.33	Gene3D:1.10.8.780	EntrezGene:100808162	Gene3D:3.30.420.40	Gene3D:3.30.420.510	MapMan:7.4.2
UniProt:A0A0R0IZX1	EMBL:ACUP02005275	EnsemblPlantsGene:GLYMA_08G285700	GO:GO:0000166	GO:GO:0003674	GO:GO:0003824
GO:GO:0004594	GO:GO:0005488	GO:GO:0005524	GO:GO:0006139	GO:GO:0008150	GO:GO:0008152
GO:GO:0009058	GO:GO:0009987	GO:GO:0015937	GO:GO:0016301	GO:GO:0016310	GO:GO:0016740
EnsemblPlants:KRH45653	ProteinID:KRH45653	ProteinID:KRH45653.1	PFAM:PF03630	PANTHER:PTHR12280	PANTHER:PTHR12280:SF44
MetaCyc:PWY-3961	SUPFAM:SSF53067	TIGRFAMs:TIGR00555	InterPro:Type_II_PanK	UniParc:UPI0006ED8918	SEG:seg

Description

hypothetical protein

Coordinates

chr8:+:39549927..39556712

Molecular Weight (calculated)

47067.3 Da

IEP (calculated)

6.126

GRAVY (calculated)

-0.216

Length

429 amino acids

Sequence
(BLAST)

001: MKLGTESVPS ENFKILLCLP EAIGWANVYN PAENICSSDG CACSGSLAKL VYFTKDDDHL VDGEEGISHR KALEKSDSSK QYPVLNGKLN FKKFETSRIN
101: DCIEFIKSMK LHIGGSQPQE NPGSQPIAIK ATGGGAYKYP DLFKERLGII LDKEDEMDCL VAGANFLLEV VHQEAFTYMG DQKQFVQIDP NDLYPYLLVN
201: IGSGVGMIKV EGEGKFERVS GTSIGGGTFW GLGKLLTKCK SFDELLELSY RGNNRAVDML VGDIYGGMDY SKIGLSSTAI ASSFGKAISD NKERGDYKPE
301: DIARSLLRMI SNNIGQISYL NALRFGLKRI FFGGFFIRRH PFTMDTLSVA VNFWSKGEAK AMFLRHEGFL GGVGAFMSSD KHGLKELLAN QVVQRSPSKL
401: SFAVDKTLHG SPDGEFNGDE SIECSVYAA

Best Arabidopsis Sequence Match ( AT1G60440.1 )
(BLAST)

001: MDPTQISHLA LDIGGTLIKL VYFSANGDYS EESRNGCSVV KGRLCFAKFE TRKIDDCLEF IRFNILHHSG VQQPNGEGHD KLYVKATGGG AFKFADLFKE
101: KLGILFDKED EMCSLVGGVN FLLKTVPREA FTYLDGQKKF VEIDHNDLYP YLLVNIGSGV SMIKVDGDGK YERISGTSLG GGTFLGLGKL LTKCKSFDEL
201: LELSHHGNNR VIDMLVGDIY GGTDYSKIGL SSTAIASSFG KAISDGKELE DYQPEDVARS LLRMISNNIG QIAYLNALRF GLKRIFFGGF FIRGLEYTMD
301: TISVAVHFWS RGEAKAMFLR HEGFLGALGA FTSYNDQSHN DLKPHHHTVQ RAILNCSGHN FRHIPVTSNL NESETIECSI NLV

Arabidopsis Description

PANK1Pantothenate kinase 1 [Source:UniProtKB/Swiss-Prot;Acc:O80765]
SUBAcon: [cytosol]

Hydropathy Plot

About CropPAL

The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.