Subcellular Localization
min:
: max
Winner_takes_all: cytosol
Predictor Summary:
Predictor Summary:
- nucleus 2
- cytosol 3
- plastid 2
- mitochondrion 1
| Predictors | GFP | MS/MS | Papers |
|---|---|---|---|
PPI
Inferred distinct locusB in Crop
| locusB | locations |
|---|---|
| GSMUA_Achr6P09090_001 |
Inferred from Arabidopsis experimental PPI
| Ath locusA | locusB | Ath locusB | Paper |
|---|---|---|---|
| AT1G60440.1 | GSMUA_Achr6P09090_001 | AT1G60440.1 | 21798944 |
Homology
Paralog
| locus | Identity | Homology Identity |
|---|
Ortholog
| locus | Homology Species | Location | Identity | Homology Identity |
|---|---|---|---|---|
| VIT_01s0127g00490.t01 | Wine grape | cytosol | 54.84 | 60.86 |
| CDY40427 | Canola | cytosol | 38.92 | 60.74 |
| AT1G60440.1 | Thale cress | cytosol | 48.6 | 59.01 |
| KRG99350 | Soybean | cytosol | 49.46 | 55.69 |
| Solyc05g005250.2.1 | Tomato | cytosol | 49.89 | 54.46 |
| PGSC0003DMT400035152 | Potato | cytosol | 49.25 | 53.76 |
| KRH45653 | Soybean | cytosol | 46.67 | 50.58 |
| CDY53055 | Canola | cytosol | 50.32 | 40.21 |
| Bra027158.1-P | Field mustard | cytosol | 49.89 | 39.86 |
| CDY47225 | Canola | cytosol | 49.25 | 39.41 |
| HORVU5Hr1G033110.2 | Barley | cytosol | 36.56 | 38.12 |
| GSMUA_Achr9P27330_001 | Banana | cytosol | 44.3 | 31.31 |
| GSMUA_Achr9P12370_001 | Banana | cytosol | 8.17 | 10.33 |
| GSMUA_Achr6P09100_001 | Banana | golgi | 5.59 | 5.01 |
Protein Annotations
| KEGG:00770+2.7.1.33 | Gene3D:1.10.8.780 | Gene3D:3.30.420.40 | Gene3D:3.30.420.510 | MapMan:7.4.2 | GO:GO:0000166 |
| GO:GO:0003674 | GO:GO:0003824 | GO:GO:0004594 | GO:GO:0005488 | GO:GO:0005524 | GO:GO:0006139 |
| GO:GO:0008150 | GO:GO:0008152 | GO:GO:0009058 | GO:GO:0009987 | GO:GO:0015937 | GO:GO:0016301 |
| GO:GO:0016310 | GO:GO:0016740 | EnsemblPlantsGene:GSMUA_Achr6G09090_001 | EnsemblPlants:GSMUA_Achr6P09090_001 | EnsemblPlants:GSMUA_Achr6T09090_001 | UniProt:M0T5F8 |
| PFAM:PF03630 | PANTHER:PTHR12280 | PANTHER:PTHR12280:SF34 | SUPFAM:SSF53067 | TIGRFAMs:TIGR00555 | InterPro:Type_II_PanK |
| UniParc:UPI000294B4E3 | SEG:seg | : | : | : | : |
Description
Pantothenate kinase 2 [Source:GMGC_GENE;Acc:GSMUA_Achr6G09090_001]
Coordinates
chr6:+:6024936..6033988
Molecular Weight (calculated)
51937.1 Da
IEP (calculated)
7.515
GRAVY (calculated)
-0.284
Length
465 amino acids
Sequence
(BLAST)
(BLAST)
001: MVSTMTNSMH RSSSRPQLDV SRAAIQEDSE DRNPTILLPN QSDDISHLAL DIGGSLIKLV YFSRHEEQSP DDKRRSMKKR FGLSNGNRRS YPILGGRLHF
101: VKFETGKLNE CLDFISSKQL HRGGIDSPSW RSGTQTDDNI VIKATGGGAY KFADVLKERL GVSLDKEDEM SCLVAGANFL LKAIRHEAFT HMEGQKEFVQ
201: IDHNDMFPYL LVNVGSGVSI IKVDGDGKYQ RVSGTNVGGG TFWGLGRLLT KCKNFDELLE LSQQGDNSNV DMLVGDIYGG LDYSKIGLSA STIASSFGKT
301: ISETKELSDY RPEDISLSLL RMISYNIGQI SYLNALRYGL KKIFFGGFFI RGHAYTMDTI SFAVHFWSKG QAQAMFLRHE GFLGALGAFM SYEKHGLDYL
401: RAHQLVERFP MEAPCIGGKI HGPPLGNLNE KARTLFPLYN THLLELLHFL SSHCFHLSPY YPSDL
101: VKFETGKLNE CLDFISSKQL HRGGIDSPSW RSGTQTDDNI VIKATGGGAY KFADVLKERL GVSLDKEDEM SCLVAGANFL LKAIRHEAFT HMEGQKEFVQ
201: IDHNDMFPYL LVNVGSGVSI IKVDGDGKYQ RVSGTNVGGG TFWGLGRLLT KCKNFDELLE LSQQGDNSNV DMLVGDIYGG LDYSKIGLSA STIASSFGKT
301: ISETKELSDY RPEDISLSLL RMISYNIGQI SYLNALRYGL KKIFFGGFFI RGHAYTMDTI SFAVHFWSKG QAQAMFLRHE GFLGALGAFM SYEKHGLDYL
401: RAHQLVERFP MEAPCIGGKI HGPPLGNLNE KARTLFPLYN THLLELLHFL SSHCFHLSPY YPSDL
001: MAGQEDEYDP ILDNKREAEA KSQVSVAADK NMAPSTSGTP IHRSGSRPQL DLSKAEIQGN LEERDPTILL PNQSDDISHL ALDIGGSLIK LLYFSRHEDY
101: SNDDDKRKRT IKERLGITNG NLRSYPVLGG RLHFVKFETH KINECLDFIH SKQLHRRDPY PWSSKTLPLG TGVIKVTGGG AFKFADLFKE RLGVSIEKED
201: EMHCLVSGAN FLLKAIRHEA FTHMEGEKEF VQIDPNDLYP YLLVNVGSGV SIIKVDGEGK FERVSGTNVG GGTYWGLGRL LTKCKSFDEL LELSQKGDNS
301: AIDMLVGDIY GGMDYSKIGL SASTIASSFG KAISENKELD DYRPEDISLS LLRMISYNIG QISYLNALRF GLKRIFFGGF FIRGHAYTMD TISFAVHFWS
401: KGEMQAMFLR HEGFLGALGA FMSYEKHGLD DLMSHQLVER FPMGAPYTGG NIHGPPLGDL DEKISWMEKF VRRGTEITAP VPMTPSKTTG LGGFEVPSSR
501: GSALRSDASA LNVGVLHLVP TLEVFPLLAD PKTYEPNTID LSDQGEREYW LKVLSEHLPD LVDTAVASEG GTEDAKRRGD AFARAFSAHL ARLMEEPAAY
601: GKLGLANLLE LREECLREFQ FVDAYRSIKQ RENEASLAVL PDLLEELDSM SEEARLLTLI EGVLAANIFD WGSRACVDLY HKGTIIEIYR MSRNKMQRPW
701: RVDDFDAFKE RMLGSGGKQP HRHKRALLFV DNSGADVILG MLPLAREFLR RGTEVVLVAN SLPALNDVTA MELPDIVAGA AKHCDILRRA AEMGGLLVDA
801: MVNPGDGSKK DSTSAPLMVV ENGCGSPCID LRQVSSELAA AAKDADLVVL EGMGRALHTN FNAQFQCEAL KLAMVKNQRL AEKLIKGNIY DCVCRYEPPS
901: L
101: SNDDDKRKRT IKERLGITNG NLRSYPVLGG RLHFVKFETH KINECLDFIH SKQLHRRDPY PWSSKTLPLG TGVIKVTGGG AFKFADLFKE RLGVSIEKED
201: EMHCLVSGAN FLLKAIRHEA FTHMEGEKEF VQIDPNDLYP YLLVNVGSGV SIIKVDGEGK FERVSGTNVG GGTYWGLGRL LTKCKSFDEL LELSQKGDNS
301: AIDMLVGDIY GGMDYSKIGL SASTIASSFG KAISENKELD DYRPEDISLS LLRMISYNIG QISYLNALRF GLKRIFFGGF FIRGHAYTMD TISFAVHFWS
401: KGEMQAMFLR HEGFLGALGA FMSYEKHGLD DLMSHQLVER FPMGAPYTGG NIHGPPLGDL DEKISWMEKF VRRGTEITAP VPMTPSKTTG LGGFEVPSSR
501: GSALRSDASA LNVGVLHLVP TLEVFPLLAD PKTYEPNTID LSDQGEREYW LKVLSEHLPD LVDTAVASEG GTEDAKRRGD AFARAFSAHL ARLMEEPAAY
601: GKLGLANLLE LREECLREFQ FVDAYRSIKQ RENEASLAVL PDLLEELDSM SEEARLLTLI EGVLAANIFD WGSRACVDLY HKGTIIEIYR MSRNKMQRPW
701: RVDDFDAFKE RMLGSGGKQP HRHKRALLFV DNSGADVILG MLPLAREFLR RGTEVVLVAN SLPALNDVTA MELPDIVAGA AKHCDILRRA AEMGGLLVDA
801: MVNPGDGSKK DSTSAPLMVV ENGCGSPCID LRQVSSELAA AAKDADLVVL EGMGRALHTN FNAQFQCEAL KLAMVKNQRL AEKLIKGNIY DCVCRYEPPS
901: L
Arabidopsis Description
PANK2PANK2 [Source:UniProtKB/TrEMBL;Acc:A0A178V4D0]
SUBAcon: [cytosol]
SUBAcon: [cytosol]
Hydropathy Plot
About CropPAL
The Protein Annotated Locations Database (CropPAL) houses large scale proteomic and GFP localization data from published experimental studies in Soybean (Glycine max), Maize (Zea mays), Wheat (Triticum aestivum), Barley (Hordeum vulgare), Rice (Oryza sativa), Field mustard (Brassica rapa), Canola (Brassica napus), Sorghum (Sorghum bicolor), Potato (Solanum tuberosum), Tomato (Solanum lycopersicum), Banana (Musa acuminata) and Wine grape (Vitis vinifera) as well as precomputed predictions for protein subcellular localizations using protein sequences.